Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LTN1O94822 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LTN1O94822 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
LTN1O94822 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LTN1O94822 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LTN1O94822 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.87■■□□□ 1.09
LTN1O94822 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.87■■□□□ 1.09
LTN1O94822 SNX29P1-201ENST00000548357 1007 ntBASIC21.87■■□□□ 1.09
LTN1O94822 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.87■■□□□ 1.09
LTN1O94822 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.87■■□□□ 1.09
LTN1O94822 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.87■■□□□ 1.09
LTN1O94822 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.87■■□□□ 1.09
LTN1O94822 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
LTN1O94822 AC017083.2-201ENST00000608069 979 ntBASIC21.87■■□□□ 1.09
LTN1O94822 AC099568.2-201ENST00000609194 695 ntBASIC21.87■■□□□ 1.09
LTN1O94822 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LTN1O94822 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LTN1O94822 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.87■■□□□ 1.09
LTN1O94822 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.87■■□□□ 1.09
LTN1O94822 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LTN1O94822 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LTN1O94822 AL512384.1-201ENST00000406683 331 ntBASIC21.87■■□□□ 1.09
LTN1O94822 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.87■■□□□ 1.09
LTN1O94822 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.87■■□□□ 1.09
LTN1O94822 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.87■■□□□ 1.09
LTN1O94822 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.87■■□□□ 1.09
LTN1O94822 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.87■■□□□ 1.09
LTN1O94822 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LTN1O94822 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LTN1O94822 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.87■■□□□ 1.09
LTN1O94822 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.87■■□□□ 1.09
LTN1O94822 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.86■■□□□ 1.09
LTN1O94822 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.86■■□□□ 1.09
LTN1O94822 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LTN1O94822 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LTN1O94822 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.86■■□□□ 1.09
LTN1O94822 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
LTN1O94822 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
LTN1O94822 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.86■■□□□ 1.09
LTN1O94822 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LTN1O94822 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.86■■□□□ 1.09
LTN1O94822 TTTY23B-201ENST00000442790 549 ntBASIC21.86■■□□□ 1.09
LTN1O94822 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
LTN1O94822 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC21.86■■□□□ 1.09
LTN1O94822 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LTN1O94822 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.86■■□□□ 1.09
LTN1O94822 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.86■■□□□ 1.09
LTN1O94822 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
LTN1O94822 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
LTN1O94822 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LTN1O94822 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.86■■□□□ 1.09
LTN1O94822 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
LTN1O94822 AC007541.1-201ENST00000570282 1469 ntBASIC21.86■■□□□ 1.09
LTN1O94822 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LTN1O94822 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LTN1O94822 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
LTN1O94822 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
LTN1O94822 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.85■■□□□ 1.09
LTN1O94822 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.85■■□□□ 1.09
LTN1O94822 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LTN1O94822 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 ARSEP1-201ENST00000420443 635 ntBASIC21.85■■□□□ 1.09
LTN1O94822 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.85■■□□□ 1.09
LTN1O94822 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC21.85■■□□□ 1.09
LTN1O94822 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
LTN1O94822 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC21.85■■□□□ 1.09
LTN1O94822 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.85■■□□□ 1.09
LTN1O94822 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.85■■□□□ 1.09
LTN1O94822 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 PCGF3-213ENST00000620529 1899 ntBASIC21.85■■□□□ 1.09
LTN1O94822 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.85■■□□□ 1.09
LTN1O94822 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LTN1O94822 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
LTN1O94822 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
LTN1O94822 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
LTN1O94822 AL023806.1-201ENST00000603994 1649 ntBASIC21.85■■□□□ 1.09
LTN1O94822 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
LTN1O94822 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LTN1O94822 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.84■■□□□ 1.09
LTN1O94822 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LTN1O94822 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.84■■□□□ 1.09
LTN1O94822 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.84■■□□□ 1.09
LTN1O94822 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.84■■□□□ 1.09
LTN1O94822 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.84■■□□□ 1.09
LTN1O94822 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.84■■□□□ 1.09
LTN1O94822 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.84■■□□□ 1.09
LTN1O94822 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.84■■□□□ 1.09
LTN1O94822 AC008735.3-201ENST00000596646 500 ntBASIC21.84■■□□□ 1.09
LTN1O94822 AL391069.4-201ENST00000609583 481 ntBASIC21.84■■□□□ 1.09
LTN1O94822 AL033527.5-202ENST00000641632 1098 ntBASIC21.84■■□□□ 1.09
LTN1O94822 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms