Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SPTLC1P5-201ENST00000450718 252 ntBASIC7.35□□□□□ -1.23
USH2AO75445 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC7.35□□□□□ -1.23
USH2AO75445 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
USH2AO75445 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC7.35□□□□□ -1.23
USH2AO75445 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
USH2AO75445 AC010328.2-201ENST00000597698 1111 ntBASIC7.35□□□□□ -1.23
USH2AO75445 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
USH2AO75445 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
USH2AO75445 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
USH2AO75445 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC7.35□□□□□ -1.23
USH2AO75445 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 AKR7A2P1-201ENST00000460134 915 ntBASIC7.35□□□□□ -1.23
USH2AO75445 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC7.35□□□□□ -1.23
USH2AO75445 MIR4750-201ENST00000584564 56 ntBASIC7.35□□□□□ -1.23
USH2AO75445 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC7.35□□□□□ -1.23
USH2AO75445 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
USH2AO75445 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
USH2AO75445 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 USE1-206ENST00000595101 1776 ntTSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC7.35□□□□□ -1.23
USH2AO75445 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 MAGEA5-201ENST00000446757 942 ntBASIC7.35□□□□□ -1.23
USH2AO75445 IMP3P2-201ENST00000489760 475 ntBASIC7.35□□□□□ -1.23
USH2AO75445 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 ABBA01031660.1-201ENST00000635219 756 ntBASIC7.35□□□□□ -1.23
USH2AO75445 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
USH2AO75445 AC005332.7-201ENST00000614046 2005 ntBASIC7.35□□□□□ -1.23
USH2AO75445 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
USH2AO75445 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 RBM39-205ENST00000397370 612 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC7.34□□□□□ -1.23
USH2AO75445 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC7.34□□□□□ -1.23
USH2AO75445 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC7.34□□□□□ -1.23
USH2AO75445 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 AC116562.4-201ENST00000641316 2276 ntBASIC7.34□□□□□ -1.23
USH2AO75445 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC7.34□□□□□ -1.23
USH2AO75445 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 RRP7BP-205ENST00000566851 833 ntBASIC7.34□□□□□ -1.23
USH2AO75445 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC7.34□□□□□ -1.23
USH2AO75445 AL158212.4-201ENST00000624062 1286 ntBASIC7.34□□□□□ -1.23
USH2AO75445 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC7.34□□□□□ -1.23
USH2AO75445 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC7.34□□□□□ -1.23
USH2AO75445 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
USH2AO75445 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
USH2AO75445 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
USH2AO75445 ACTG1P3-201ENST00000431775 1114 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms