Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP9BO43861 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP9BO43861 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
ATP9BO43861 AC079328.2-201ENST00000561241 3354 ntBASIC17.4■□□□□ 0.38
ATP9BO43861 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP9BO43861 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP9BO43861 AGGF1P2-201ENST00000426656 2106 ntBASIC17.4■□□□□ 0.38
ATP9BO43861 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP9BO43861 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP9BO43861 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP9BO43861 AC096734.2-201ENST00000562054 433 ntBASIC17.4■□□□□ 0.38
ATP9BO43861 AC002347.1-201ENST00000569543 541 ntBASIC17.4■□□□□ 0.38
ATP9BO43861 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP9BO43861 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP9BO43861 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP9BO43861 GPALPP1-207ENST00000611650 899 ntBASIC17.4■□□□□ 0.38
ATP9BO43861 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATP9BO43861 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP9BO43861 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP9BO43861 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP9BO43861 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP9BO43861 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATP9BO43861 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ATP9BO43861 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ATP9BO43861 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 YBX2P1-201ENST00000394192 760 ntBASIC17.39■□□□□ 0.37
ATP9BO43861 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP9BO43861 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.39■□□□□ 0.37
ATP9BO43861 AC023274.1-201ENST00000418278 595 ntBASIC17.39■□□□□ 0.37
ATP9BO43861 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP9BO43861 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP9BO43861 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
ATP9BO43861 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP9BO43861 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP9BO43861 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.39■□□□□ 0.37
ATP9BO43861 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP9BO43861 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP9BO43861 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ATP9BO43861 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ATP9BO43861 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP9BO43861 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP9BO43861 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.39■□□□□ 0.37
ATP9BO43861 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP9BO43861 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ATP9BO43861 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP9BO43861 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP9BO43861 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP9BO43861 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
ATP9BO43861 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
ATP9BO43861 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 RHOQP3-201ENST00000437982 621 ntBASIC17.38■□□□□ 0.37
ATP9BO43861 AC087163.2-201ENST00000457299 853 ntBASIC17.38■□□□□ 0.37
ATP9BO43861 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATP9BO43861 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP9BO43861 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP9BO43861 AC018845.2-201ENST00000568326 409 ntBASIC17.38■□□□□ 0.37
ATP9BO43861 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP9BO43861 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATP9BO43861 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATP9BO43861 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP9BO43861 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP9BO43861 AC002310.6-201ENST00000624451 1377 ntBASIC17.38■□□□□ 0.37
ATP9BO43861 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP9BO43861 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms