Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CUX2O14529 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CUX2O14529 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC28.18■■■□□ 2.1
CUX2O14529 IMP3P2-201ENST00000489760 475 ntBASIC28.18■■■□□ 2.1
CUX2O14529 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC28.18■■■□□ 2.1
CUX2O14529 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC28.18■■■□□ 2.1
CUX2O14529 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC28.18■■■□□ 2.1
CUX2O14529 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC28.18■■■□□ 2.1
CUX2O14529 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC28.18■■■□□ 2.1
CUX2O14529 AC091812.3-201ENST00000621362 345 ntBASIC28.18■■■□□ 2.1
CUX2O14529 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CUX2O14529 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CUX2O14529 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC28.18■■■□□ 2.1
CUX2O14529 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CUX2O14529 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
CUX2O14529 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC28.17■■■□□ 2.1
CUX2O14529 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC28.17■■■□□ 2.1
CUX2O14529 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC28.17■■■□□ 2.1
CUX2O14529 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
CUX2O14529 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC28.17■■■□□ 2.1
CUX2O14529 AC004898.1-201ENST00000451057 766 ntBASIC28.17■■■□□ 2.1
CUX2O14529 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC28.17■■■□□ 2.1
CUX2O14529 CU634019.7-201ENST00000624153 1185 ntBASIC28.17■■■□□ 2.1
CUX2O14529 FP236241.2-201ENST00000624906 1185 ntBASIC28.17■■■□□ 2.1
CUX2O14529 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC28.17■■■□□ 2.1
CUX2O14529 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC28.17■■■□□ 2.1
CUX2O14529 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CUX2O14529 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
CUX2O14529 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
CUX2O14529 KRT8P22-201ENST00000562317 1415 ntBASIC28.17■■■□□ 2.1
CUX2O14529 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC28.17■■■□□ 2.1
CUX2O14529 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CUX2O14529 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
CUX2O14529 PKD1P6-201ENST00000343738 4769 ntBASIC28.17■■■□□ 2.1
CUX2O14529 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC28.17■■■□□ 2.1
CUX2O14529 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC28.16■■■□□ 2.1
CUX2O14529 IMPDH1P4-201ENST00000445028 1534 ntBASIC28.16■■■□□ 2.1
CUX2O14529 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC28.16■■■□□ 2.1
CUX2O14529 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 SPDYE17-201ENST00000412399 783 ntBASIC28.16■■■□□ 2.1
CUX2O14529 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 AC007969.1-201ENST00000433675 447 ntBASIC28.16■■■□□ 2.1
CUX2O14529 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC28.16■■■□□ 2.1
CUX2O14529 KRT90P-201ENST00000549264 1064 ntBASIC28.16■■■□□ 2.1
CUX2O14529 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 AL391069.4-201ENST00000609583 481 ntBASIC28.16■■■□□ 2.1
CUX2O14529 AC005695.3-201ENST00000614522 232 ntBASIC28.16■■■□□ 2.1
CUX2O14529 AC008687.7-202ENST00000637404 953 ntBASIC28.16■■■□□ 2.1
CUX2O14529 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
CUX2O14529 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
CUX2O14529 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC28.16■■■□□ 2.1
CUX2O14529 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CUX2O14529 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
CUX2O14529 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
CUX2O14529 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CUX2O14529 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CUX2O14529 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC28.15■■■□□ 2.1
CUX2O14529 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CUX2O14529 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
CUX2O14529 KRT18P66-201ENST00000452970 1269 ntBASIC28.15■■■□□ 2.1
CUX2O14529 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC28.15■■■□□ 2.1
CUX2O14529 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC28.15■■■□□ 2.1
CUX2O14529 ATF5-205ENST00000600336 682 ntTSL 2 BASIC28.15■■■□□ 2.1
CUX2O14529 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC28.15■■■□□ 2.1
CUX2O14529 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC28.15■■■□□ 2.1
CUX2O14529 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC28.15■■■□□ 2.1
CUX2O14529 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CUX2O14529 TOP3BP1-201ENST00000420768 1380 ntBASIC28.15■■■□□ 2.1
CUX2O14529 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CUX2O14529 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CUX2O14529 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC28.15■■■□□ 2.1
CUX2O14529 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CUX2O14529 RPS3-201ENST00000278572 907 ntTSL 3 BASIC28.15■■■□□ 2.1
CUX2O14529 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CUX2O14529 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC28.15■■■□□ 2.1
CUX2O14529 SLC25A1P3-201ENST00000395415 828 ntBASIC28.15■■■□□ 2.1
CUX2O14529 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC28.15■■■□□ 2.1
CUX2O14529 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC28.15■■■□□ 2.1
CUX2O14529 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
CUX2O14529 TSACC-208ENST00000481479 741 ntTSL 2 BASIC28.15■■■□□ 2.1
CUX2O14529 FTH1P14-201ENST00000482930 551 ntBASIC28.15■■■□□ 2.1
CUX2O14529 RHOXF1P1-202ENST00000635473 501 ntBASIC28.15■■■□□ 2.1
CUX2O14529 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC28.14■■■□□ 2.1
CUX2O14529 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC28.14■■■□□ 2.1
CUX2O14529 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms