Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX1O00570 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.61■□□□□ 0.41
SOX1O00570 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.61■□□□□ 0.41
SOX1O00570 FNTAP2-201ENST00000430308 634 ntBASIC17.61■□□□□ 0.41
SOX1O00570 AL162726.2-201ENST00000438986 1017 ntBASIC17.61■□□□□ 0.41
SOX1O00570 AC114501.1-201ENST00000445949 172 ntBASIC17.61■□□□□ 0.41
SOX1O00570 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX1O00570 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX1O00570 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.61■□□□□ 0.41
SOX1O00570 MIR4492-201ENST00000581627 80 ntBASIC17.61■□□□□ 0.41
SOX1O00570 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX1O00570 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX1O00570 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.61■□□□□ 0.41
SOX1O00570 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX1O00570 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX1O00570 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SOX1O00570 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.61■□□□□ 0.41
SOX1O00570 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX1O00570 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX1O00570 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX1O00570 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.61■□□□□ 0.41
SOX1O00570 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX1O00570 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX1O00570 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SOX1O00570 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX1O00570 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX1O00570 HIST2H2BC-201ENST00000498492 580 ntBASIC17.6■□□□□ 0.41
SOX1O00570 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX1O00570 DUX4L45-201ENST00000566406 1057 ntBASIC17.6■□□□□ 0.41
SOX1O00570 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.6■□□□□ 0.41
SOX1O00570 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX1O00570 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX1O00570 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX1O00570 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX1O00570 REXO1L11P-201ENST00000620964 1927 ntBASIC17.6■□□□□ 0.41
SOX1O00570 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SOX1O00570 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 AC116562.4-201ENST00000641316 2276 ntBASIC17.6■□□□□ 0.41
SOX1O00570 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX1O00570 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX1O00570 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SOX1O00570 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SOX1O00570 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SOX1O00570 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX1O00570 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX1O00570 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.59■□□□□ 0.41
SOX1O00570 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.59■□□□□ 0.41
SOX1O00570 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SOX1O00570 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.59■□□□□ 0.41
SOX1O00570 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 AC234644.1-201ENST00000406065 370 ntBASIC17.59■□□□□ 0.41
SOX1O00570 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.59■□□□□ 0.41
SOX1O00570 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX1O00570 RN7SL769P-201ENST00000469386 295 ntBASIC17.59■□□□□ 0.41
SOX1O00570 FTH1P14-201ENST00000482930 551 ntBASIC17.59■□□□□ 0.41
SOX1O00570 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX1O00570 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX1O00570 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.59■□□□□ 0.41
SOX1O00570 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.59■□□□□ 0.41
SOX1O00570 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX1O00570 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.59■□□□□ 0.41
SOX1O00570 MPDU1-223ENST00000582151 728 ntBASIC17.59■□□□□ 0.41
SOX1O00570 AL008638.5-201ENST00000623814 1298 ntBASIC17.59■□□□□ 0.41
SOX1O00570 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
SOX1O00570 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX1O00570 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms