Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.92■□□□□ 0.14
UPK1AO00322 RNPS1P1-201ENST00000507437 918 ntBASIC15.92■□□□□ 0.14
UPK1AO00322 AC073648.2-201ENST00000510116 352 ntBASIC15.92■□□□□ 0.14
UPK1AO00322 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.92■□□□□ 0.14
UPK1AO00322 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.92■□□□□ 0.14
UPK1AO00322 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
UPK1AO00322 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.92■□□□□ 0.14
UPK1AO00322 TUBB8P12-201ENST00000308911 1335 ntBASIC15.92■□□□□ 0.14
UPK1AO00322 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 TUBB7P-202ENST00000428444 1305 ntBASIC15.92■□□□□ 0.14
UPK1AO00322 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.92■□□□□ 0.14
UPK1AO00322 TUBB8P7-204ENST00000567960 1332 ntBASIC15.92■□□□□ 0.14
UPK1AO00322 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
UPK1AO00322 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.91■□□□□ 0.14
UPK1AO00322 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
UPK1AO00322 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
UPK1AO00322 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.91■□□□□ 0.14
UPK1AO00322 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 PTCHD3P3-201ENST00000403073 906 ntBASIC15.91■□□□□ 0.14
UPK1AO00322 FAM197Y8-203ENST00000450145 560 ntBASIC15.91■□□□□ 0.14
UPK1AO00322 PAWRP1-201ENST00000451083 565 ntBASIC15.91■□□□□ 0.14
UPK1AO00322 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.91■□□□□ 0.14
UPK1AO00322 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
UPK1AO00322 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.91■□□□□ 0.14
UPK1AO00322 AC006557.2-201ENST00000592985 1240 ntBASIC15.91■□□□□ 0.14
UPK1AO00322 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.91■□□□□ 0.14
UPK1AO00322 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
UPK1AO00322 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 ME2P1-201ENST00000426028 1970 ntBASIC15.91■□□□□ 0.14
UPK1AO00322 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.91■□□□□ 0.14
UPK1AO00322 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
UPK1AO00322 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.91■□□□□ 0.14
UPK1AO00322 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.9■□□□□ 0.14
UPK1AO00322 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 AC092384.3-202ENST00000564646 2873 ntBASIC15.9■□□□□ 0.14
UPK1AO00322 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
UPK1AO00322 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
UPK1AO00322 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.9■□□□□ 0.14
UPK1AO00322 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
UPK1AO00322 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.9■□□□□ 0.14
UPK1AO00322 ELK2BP-201ENST00000415014 1224 ntBASIC15.9■□□□□ 0.14
UPK1AO00322 KRT18P27-201ENST00000427733 1299 ntBASIC15.9■□□□□ 0.14
UPK1AO00322 AC079781.3-201ENST00000449110 356 ntBASIC15.9■□□□□ 0.14
UPK1AO00322 AC018712.1-201ENST00000455767 687 ntBASIC15.9■□□□□ 0.14
UPK1AO00322 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
UPK1AO00322 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
UPK1AO00322 OR7E14P-202ENST00000530490 1290 ntBASIC15.9■□□□□ 0.14
UPK1AO00322 KRT126P-201ENST00000549467 1181 ntBASIC15.9■□□□□ 0.14
UPK1AO00322 AC104640.1-201ENST00000562617 2109 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms