Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 KRT18P22-201ENST00000402024 1347 ntBASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 SLC25A3P1-201ENST00000443844 931 ntBASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 POU5F1P6-201ENST00000466990 990 ntBASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 AC011558.1-201ENST00000623459 338 ntBASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
TCRBV3S1A0A5B6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.71■□□□□ 0.1
TCRBV3S1A0A5B6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TCRBV3S1A0A5B6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TCRBV3S1A0A5B6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TCRBV3S1A0A5B6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TCRBV3S1A0A5B6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms