Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TNNQ9UQP3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.28■■□□□ 1
TNNQ9UQP3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.28■■□□□ 1
TNNQ9UQP3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TNNQ9UQP3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 RHOQP3-201ENST00000437982 621 ntBASIC21.28■■□□□ 1
TNNQ9UQP3 AL513480.1-201ENST00000451731 511 ntBASIC21.28■■□□□ 1
TNNQ9UQP3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.28■■□□□ 1
TNNQ9UQP3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.28■■□□□ 1
TNNQ9UQP3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.28■■□□□ 1
TNNQ9UQP3 AC005412.3-201ENST00000580309 715 ntBASIC21.28■■□□□ 1
TNNQ9UQP3 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.28■■□□□ 1
TNNQ9UQP3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 AL139011.1-202ENST00000642063 584 ntBASIC21.28■■□□□ 1
TNNQ9UQP3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC21.28■■□□□ 1
TNNQ9UQP3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.28■■□□□ 1
TNNQ9UQP3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.28■■□□□ 1
TNNQ9UQP3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNNQ9UQP3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.28■■□□□ 1
TNNQ9UQP3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNNQ9UQP3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNNQ9UQP3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TNNQ9UQP3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
TNNQ9UQP3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNNQ9UQP3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNNQ9UQP3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
TNNQ9UQP3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNNQ9UQP3 ME2P1-201ENST00000426028 1970 ntBASIC21.27■■□□□ 1
TNNQ9UQP3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNNQ9UQP3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
TNNQ9UQP3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TNNQ9UQP3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.27■■□□□ 1
TNNQ9UQP3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.27■■□□□ 1
TNNQ9UQP3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TNNQ9UQP3 HLA-J-202ENST00000469281 1241 ntBASIC21.27■■□□□ 1
TNNQ9UQP3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.27■■□□□ 1
TNNQ9UQP3 AC087641.1-201ENST00000557561 1021 ntBASIC21.27■■□□□ 1
TNNQ9UQP3 AC140113.2-201ENST00000604370 208 ntBASIC21.27■■□□□ 1
TNNQ9UQP3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNNQ9UQP3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC21.27■□□□□ 0.99
TNNQ9UQP3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
TNNQ9UQP3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TNNQ9UQP3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TNNQ9UQP3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TNNQ9UQP3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.27■□□□□ 0.99
TNNQ9UQP3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.27■□□□□ 0.99
TNNQ9UQP3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 AC012569.1-201ENST00000591191 1524 ntBASIC21.26■□□□□ 0.99
TNNQ9UQP3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 AC106730.1-201ENST00000566722 1090 ntBASIC21.26■□□□□ 0.99
TNNQ9UQP3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.26■□□□□ 0.99
TNNQ9UQP3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNNQ9UQP3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms