Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 ANKRD19P-201ENST00000338192 862 ntBASIC21.09■□□□□ 0.97
CCNL1Q9UK58 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 RPS15-212ENST00000593052 629 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNL1Q9UK58 AC116353.5-201ENST00000638148 1699 ntBASIC21.09■□□□□ 0.97
CCNL1Q9UK58 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNL1Q9UK58 BICD1-207ENST00000551848 1962 ntBASIC21.08■□□□□ 0.96
CCNL1Q9UK58 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.08■□□□□ 0.96
CCNL1Q9UK58 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.08■□□□□ 0.96
CCNL1Q9UK58 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCNL1Q9UK58 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.08■□□□□ 0.96
CCNL1Q9UK58 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.08■□□□□ 0.96
CCNL1Q9UK58 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCNL1Q9UK58 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 SPDYE17-201ENST00000412399 783 ntBASIC21.07■□□□□ 0.96
CCNL1Q9UK58 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNL1Q9UK58 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.06■□□□□ 0.96
CCNL1Q9UK58 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms