Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 PMS2P4-201ENST00000412466 1052 ntBASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 GGT4P-201ENST00000623672 1708 ntBASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.4■□□□□ 0.86
ECHDC1Q9NTX5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ECHDC1Q9NTX5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ECHDC1Q9NTX5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
ECHDC1Q9NTX5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
ECHDC1Q9NTX5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ECHDC1Q9NTX5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ECHDC1Q9NTX5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ECHDC1Q9NTX5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 AC109635.5-201ENST00000533593 962 ntBASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 AL009183.1-201ENST00000603760 355 ntBASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 AC068137.2-201ENST00000605408 478 ntBASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ECHDC1Q9NTX5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 AC002347.1-201ENST00000569543 541 ntBASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 AP002472.1-201ENST00000577490 586 ntBASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ECHDC1Q9NTX5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 AC099398.1-201ENST00000567919 2776 ntBASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ECHDC1Q9NTX5 AC004832.2-201ENST00000426397 482 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms