Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 AC068472.1-201ENST00000474589 881 ntBASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 AC010203.1-204ENST00000548782 407 ntBASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C12orf4Q9NQ89 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 AC087499.1-201ENST00000418141 1075 ntBASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 AL359075.1-203ENST00000462729 1002 ntBASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 AC093525.9-201ENST00000624961 1746 ntBASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C12orf4Q9NQ89 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
C12orf4Q9NQ89 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
C12orf4Q9NQ89 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C12orf4Q9NQ89 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
C12orf4Q9NQ89 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.68□□□□□ -0.06
C12orf4Q9NQ89 AC097374.2-201ENST00000618617 1306 ntBASIC14.68□□□□□ -0.06
C12orf4Q9NQ89 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.68□□□□□ -0.06
C12orf4Q9NQ89 SNX18-202ENST00000343017 3140 ntBASIC14.68□□□□□ -0.06
C12orf4Q9NQ89 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
C12orf4Q9NQ89 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms