Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP13A3Q9H7F0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP13A3Q9H7F0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.96■□□□□ 0.31
ATP13A3Q9H7F0 C20orf181-201ENST00000623918 480 ntBASIC16.96■□□□□ 0.31
ATP13A3Q9H7F0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP13A3Q9H7F0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.96■□□□□ 0.31
ATP13A3Q9H7F0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATP13A3Q9H7F0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP13A3Q9H7F0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATP13A3Q9H7F0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
ATP13A3Q9H7F0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATP13A3Q9H7F0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 AC140658.5-201ENST00000438532 169 ntBASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 AC010327.4-202ENST00000591484 748 ntBASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 AC005915.1-201ENST00000624912 2018 ntBASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 AC018695.7-201ENST00000624587 2492 ntBASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 AL391256.1-201ENST00000443260 1855 ntBASIC16.95■□□□□ 0.3
ATP13A3Q9H7F0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 AC105020.1-201ENST00000435356 2205 ntBASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 AC008894.3-201ENST00000624324 3103 ntBASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 UPF3AP3-201ENST00000420996 769 ntBASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 GPX1P2-201ENST00000429271 606 ntBASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 AC112191.1-201ENST00000523689 701 ntBASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.94■□□□□ 0.3
ATP13A3Q9H7F0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 AC092919.2-201ENST00000623631 1645 ntBASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP13A3Q9H7F0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms