Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 AL671710.1-201ENST00000610245 2349 ntBASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RTFDC1Q9BY42 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 SNX33P1-201ENST00000592116 1762 ntBASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 AL512384.1-201ENST00000406683 331 ntBASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 AP006294.1-201ENST00000415407 339 ntBASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 AC114501.2-201ENST00000439631 535 ntBASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 AC093004.1-201ENST00000508850 424 ntBASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 AC106886.1-201ENST00000568660 600 ntBASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.16■□□□□ 0.82
RTFDC1Q9BY42 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 RN7SL618P-201ENST00000477850 296 ntBASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 DOC2GP-202ENST00000514950 1163 ntBASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 TUBB8P12-201ENST00000308911 1335 ntBASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 TUBB7P-202ENST00000428444 1305 ntBASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 TUBB8P7-204ENST00000567960 1332 ntBASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 AC020763.4-201ENST00000623414 4170 ntBASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTFDC1Q9BY42 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
RTFDC1Q9BY42 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTFDC1Q9BY42 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTFDC1Q9BY42 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RTFDC1Q9BY42 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RTFDC1Q9BY42 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTFDC1Q9BY42 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.14■□□□□ 0.81
RTFDC1Q9BY42 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms