Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NOTCH4Q99466 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.06■□□□□ 0.32
NOTCH4Q99466 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NOTCH4Q99466 AL512652.2-201ENST00000625156 1716 ntBASIC17.06■□□□□ 0.32
NOTCH4Q99466 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NOTCH4Q99466 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 AC060834.1-201ENST00000443027 2032 ntBASIC17.06■□□□□ 0.32
NOTCH4Q99466 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.06■□□□□ 0.32
NOTCH4Q99466 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.06■□□□□ 0.32
NOTCH4Q99466 HILS1-202ENST00000545329 423 ntBASIC17.06■□□□□ 0.32
NOTCH4Q99466 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.06■□□□□ 0.32
NOTCH4Q99466 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.06■□□□□ 0.32
NOTCH4Q99466 AL008721.1-201ENST00000609964 604 ntBASIC17.06■□□□□ 0.32
NOTCH4Q99466 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NOTCH4Q99466 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NOTCH4Q99466 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NOTCH4Q99466 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NOTCH4Q99466 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NOTCH4Q99466 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NOTCH4Q99466 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NOTCH4Q99466 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NOTCH4Q99466 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 GIMAP3P-201ENST00000495150 836 ntBASIC17.05■□□□□ 0.32
NOTCH4Q99466 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NOTCH4Q99466 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NOTCH4Q99466 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.05■□□□□ 0.32
NOTCH4Q99466 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 SPDYE19P-201ENST00000338590 713 ntBASIC17.04■□□□□ 0.32
NOTCH4Q99466 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 AL353779.1-201ENST00000434793 351 ntBASIC17.04■□□□□ 0.32
NOTCH4Q99466 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 GNAQP1-201ENST00000444815 1067 ntBASIC17.04■□□□□ 0.32
NOTCH4Q99466 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 AC024267.1-201ENST00000582320 895 ntBASIC17.04■□□□□ 0.32
NOTCH4Q99466 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 AC007431.3-201ENST00000623221 587 ntBASIC17.04■□□□□ 0.32
NOTCH4Q99466 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NOTCH4Q99466 AL603756.1-201ENST00000606511 2163 ntBASIC17.04■□□□□ 0.32
NOTCH4Q99466 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NOTCH4Q99466 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NOTCH4Q99466 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NOTCH4Q99466 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms