Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 SLC25A1P3-201ENST00000395415 828 ntBASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 AL353732.1-201ENST00000569618 1459 ntBASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC46A1Q96NT5 EGFEM1P-202ENST00000431685 1563 ntBASIC16■□□□□ 0.15
SLC46A1Q96NT5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 CEP83-AS1-201ENST00000623122 2482 ntBASIC16■□□□□ 0.15
SLC46A1Q96NT5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 AC092580.3-201ENST00000430932 139 ntBASIC16■□□□□ 0.15
SLC46A1Q96NT5 AC241585.1-201ENST00000433527 519 ntBASIC16■□□□□ 0.15
SLC46A1Q96NT5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 AP000842.3-202ENST00000569238 1080 ntBASIC16■□□□□ 0.15
SLC46A1Q96NT5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC46A1Q96NT5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16■□□□□ 0.15
SLC46A1Q96NT5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 AL645608.8-201ENST00000606034 2086 ntBASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 HCG4-201ENST00000418983 998 ntBASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 AC004890.2-204ENST00000481968 304 ntBASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 AC027307.2-201ENST00000591252 911 ntBASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC46A1Q96NT5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms