Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.05■□□□□ 0.16
ITCHQ96J02 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.05■□□□□ 0.16
ITCHQ96J02 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.05■□□□□ 0.16
ITCHQ96J02 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
ITCHQ96J02 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ITCHQ96J02 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.05■□□□□ 0.16
ITCHQ96J02 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.05■□□□□ 0.16
ITCHQ96J02 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.05■□□□□ 0.16
ITCHQ96J02 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ITCHQ96J02 AC104819.1-201ENST00000504587 486 ntBASIC16.05■□□□□ 0.16
ITCHQ96J02 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
ITCHQ96J02 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 AC092329.2-201ENST00000598402 547 ntBASIC16.05■□□□□ 0.16
ITCHQ96J02 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ITCHQ96J02 AL139011.1-202ENST00000642063 584 ntBASIC16.05■□□□□ 0.16
ITCHQ96J02 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 ME2P1-201ENST00000426028 1970 ntBASIC16.05■□□□□ 0.16
ITCHQ96J02 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.05■□□□□ 0.16
ITCHQ96J02 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ITCHQ96J02 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.05■□□□□ 0.16
ITCHQ96J02 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 AC022188.1-201ENST00000620960 1664 ntBASIC16.05■□□□□ 0.16
ITCHQ96J02 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ITCHQ96J02 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITCHQ96J02 AC079776.2-201ENST00000641154 1609 ntBASIC16.05■□□□□ 0.16
ITCHQ96J02 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
ITCHQ96J02 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ITCHQ96J02 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ITCHQ96J02 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ITCHQ96J02 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ITCHQ96J02 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ITCHQ96J02 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
ITCHQ96J02 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 PCED1CP-201ENST00000419887 785 ntBASIC16.04■□□□□ 0.16
ITCHQ96J02 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
ITCHQ96J02 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.04■□□□□ 0.16
ITCHQ96J02 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.04■□□□□ 0.16
ITCHQ96J02 AL049597.2-201ENST00000565575 961 ntBASIC16.04■□□□□ 0.16
ITCHQ96J02 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.04■□□□□ 0.16
ITCHQ96J02 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.04■□□□□ 0.16
ITCHQ96J02 TERC-201ENST00000602385 541 ntBASIC16.04■□□□□ 0.16
ITCHQ96J02 AC013467.2-201ENST00000605472 835 ntBASIC16.04■□□□□ 0.16
ITCHQ96J02 AC010331.1-201ENST00000611423 582 ntBASIC16.04■□□□□ 0.16
ITCHQ96J02 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ITCHQ96J02 AC006277.1-201ENST00000624348 1610 ntBASIC16.04■□□□□ 0.16
ITCHQ96J02 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ITCHQ96J02 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ITCHQ96J02 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ITCHQ96J02 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.04■□□□□ 0.16
ITCHQ96J02 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITCHQ96J02 AC007950.2-201ENST00000615045 2347 ntBASIC16.03■□□□□ 0.16
ITCHQ96J02 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.03■□□□□ 0.16
ITCHQ96J02 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ITCHQ96J02 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.03■□□□□ 0.16
ITCHQ96J02 AC243591.1-201ENST00000452967 1364 ntBASIC16.03■□□□□ 0.16
ITCHQ96J02 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.03■□□□□ 0.16
ITCHQ96J02 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.03■□□□□ 0.16
ITCHQ96J02 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITCHQ96J02 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.03■□□□□ 0.16
ITCHQ96J02 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.03■□□□□ 0.16
ITCHQ96J02 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.03■□□□□ 0.16
ITCHQ96J02 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.03■□□□□ 0.16
ITCHQ96J02 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.03■□□□□ 0.16
ITCHQ96J02 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.03■□□□□ 0.16
ITCHQ96J02 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms