Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SSMEM1Q8WWF3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 YBX2P1-201ENST00000394192 760 ntBASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 GPX1P2-201ENST00000429271 606 ntBASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 PRSS29P-201ENST00000440800 595 ntBASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 AC010327.4-202ENST00000591484 748 ntBASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 AC008667.4-201ENST00000607370 168 ntBASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 AL691403.2-201ENST00000618460 490 ntBASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSMEM1Q8WWF3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 AC097637.2-201ENST00000624096 1997 ntBASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 AGGF1P2-201ENST00000426656 2106 ntBASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 AC108073.2-201ENST00000464002 357 ntBASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 IGHV3-65-201ENST00000523210 341 ntBASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 AL805961.1-202ENST00000641562 540 ntBASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.96□□□□□ -0.17
SSMEM1Q8WWF3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.96□□□□□ -0.18
SSMEM1Q8WWF3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSMEM1Q8WWF3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SSMEM1Q8WWF3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SSMEM1Q8WWF3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SSMEM1Q8WWF3 FLJ16779-201ENST00000612722 7638 ntBASIC13.96□□□□□ -0.18
SSMEM1Q8WWF3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SSMEM1Q8WWF3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SSMEM1Q8WWF3 AC002310.6-201ENST00000624451 1377 ntBASIC13.96□□□□□ -0.18
SSMEM1Q8WWF3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SSMEM1Q8WWF3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSMEM1Q8WWF3 PCDH8P1-201ENST00000428983 2773 ntBASIC13.95□□□□□ -0.18
SSMEM1Q8WWF3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSMEM1Q8WWF3 AC105020.1-201ENST00000435356 2205 ntBASIC13.95□□□□□ -0.18
SSMEM1Q8WWF3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SSMEM1Q8WWF3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SSMEM1Q8WWF3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SSMEM1Q8WWF3 AC060834.1-201ENST00000443027 2032 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms