Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 AC124947.2-201ENST00000547118 1133 ntBASIC20.16■□□□□ 0.82
SNED1Q8TER0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 CTBP2P3-201ENST00000585629 1255 ntBASIC20.16■□□□□ 0.82
SNED1Q8TER0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SNED1Q8TER0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNED1Q8TER0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 KRT8P12-202ENST00000472924 1397 ntBASIC20.15■□□□□ 0.82
SNED1Q8TER0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 PP12613-201ENST00000424958 2230 ntBASIC20.15■□□□□ 0.82
SNED1Q8TER0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 AC023310.3-201ENST00000557027 670 ntBASIC20.15■□□□□ 0.82
SNED1Q8TER0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 AC100756.1-201ENST00000562736 682 ntBASIC20.15■□□□□ 0.82
SNED1Q8TER0 AC138749.3-201ENST00000567691 622 ntBASIC20.15■□□□□ 0.82
SNED1Q8TER0 AC116165.1-201ENST00000611806 668 ntBASIC20.15■□□□□ 0.82
SNED1Q8TER0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNED1Q8TER0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SNED1Q8TER0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.14■□□□□ 0.82
SNED1Q8TER0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SNED1Q8TER0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 TTTY23B-201ENST00000442790 549 ntBASIC20.14■□□□□ 0.81
SNED1Q8TER0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.14■□□□□ 0.81
SNED1Q8TER0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SNED1Q8TER0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
SNED1Q8TER0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.14■□□□□ 0.81
SNED1Q8TER0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.14■□□□□ 0.81
SNED1Q8TER0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNED1Q8TER0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SNED1Q8TER0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 RAB43P1-201ENST00000561790 589 ntBASIC20.13■□□□□ 0.81
SNED1Q8TER0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SNED1Q8TER0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNED1Q8TER0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms