Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 AC092364.2-201ENST00000596710 2692 ntBASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 AC108751.1-201ENST00000490852 363 ntBASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 POLD2P1-201ENST00000511220 997 ntBASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 IGHV3-22-201ENST00000520721 359 ntBASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 UNC93B6-202ENST00000528242 690 ntBASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 GPALPP1-207ENST00000611650 899 ntBASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 ACTL9-202ENST00000612068 1252 ntBASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 AC010654.1-201ENST00000615722 808 ntBASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH19Q8TAB3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 PRSS29P-201ENST00000440800 595 ntBASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 FAM185BP-201ENST00000443595 716 ntBASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 AC009947.1-201ENST00000444350 727 ntBASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 AC006538.3-201ENST00000612495 578 ntBASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH19Q8TAB3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 AL031731.1-201ENST00000642131 2094 ntBASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 ZNF259P1-201ENST00000407656 1365 ntBASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 GGT3P-204ENST00000453783 1664 ntBASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 ME2P1-201ENST00000426028 1970 ntBASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH19Q8TAB3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms