Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 AC026979.3-201ENST00000607315 403 ntBASIC10.36□□□□□ -0.75
SVIPQ8NHG7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 CYP2B6-201ENST00000324071 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 ZWINT-204ENST00000395405 1851 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.36□□□□□ -0.75
SVIPQ8NHG7 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 FGD5P1-202ENST00000614866 2498 ntBASIC10.35□□□□□ -0.75
SVIPQ8NHG7 AC004490.1-201ENST00000585593 2738 ntTSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 EIF3EP2-201ENST00000423042 1814 ntBASIC10.35□□□□□ -0.75
SVIPQ8NHG7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 AL445471.2-201ENST00000568143 2443 ntBASIC10.35□□□□□ -0.75
SVIPQ8NHG7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 CNBD2-204ENST00000489667 2531 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 OXCT2P1-201ENST00000447263 1535 ntBASIC10.35□□□□□ -0.75
SVIPQ8NHG7 BID-203ENST00000399765 1879 ntTSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 AC144652.1-201ENST00000609974 1624 ntBASIC10.35□□□□□ -0.75
SVIPQ8NHG7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 AL157414.3-201ENST00000624276 1954 ntBASIC10.35□□□□□ -0.75
SVIPQ8NHG7 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.35□□□□□ -0.75
SVIPQ8NHG7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 DNMBP-AS1-202ENST00000434409 2034 ntTSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 SRSF7-209ENST00000446327 2453 ntTSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 AC087203.3-201ENST00000602981 1547 ntBASIC10.34□□□□□ -0.75
SVIPQ8NHG7 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SVIPQ8NHG7 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms