Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 CEND1P1-201ENST00000451006 455 ntBASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 AC010654.1-201ENST00000615722 808 ntBASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 BCAR1-209ENST00000546196 1340 ntBASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC33Q8N5R6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC33Q8N5R6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC33Q8N5R6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 AL353135.1-201ENST00000606729 504 ntBASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 AC010507.1-201ENST00000633895 436 ntBASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC33Q8N5R6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 AC254562.1-201ENST00000417586 456 ntBASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 ACTG1P4-201ENST00000425123 1122 ntBASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 CNN2P11-201ENST00000429351 262 ntBASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 AL118508.1-201ENST00000613502 2345 ntBASIC17.63■□□□□ 0.41
CCDC33Q8N5R6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC33Q8N5R6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms