Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF546Q86UE3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 CCR12P-201ENST00000446203 998 ntBASIC14.01□□□□□ -0.17
ZNF546Q86UE3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 AL353719.1-201ENST00000566847 864 ntBASIC14.01□□□□□ -0.17
ZNF546Q86UE3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF546Q86UE3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
ZNF546Q86UE3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ZNF546Q86UE3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14□□□□□ -0.17
ZNF546Q86UE3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14□□□□□ -0.17
ZNF546Q86UE3 PPT1-215ENST00000641471 2368 ntBASIC14□□□□□ -0.17
ZNF546Q86UE3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 AC113404.2-201ENST00000507884 177 ntBASIC14□□□□□ -0.17
ZNF546Q86UE3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 BX088651.1-201ENST00000540551 451 ntBASIC14□□□□□ -0.17
ZNF546Q86UE3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14□□□□□ -0.17
ZNF546Q86UE3 AL023803.3-201ENST00000615559 522 ntBASIC14□□□□□ -0.17
ZNF546Q86UE3 AL359736.2-201ENST00000621992 437 ntBASIC14□□□□□ -0.17
ZNF546Q86UE3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ZNF546Q86UE3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14□□□□□ -0.17
ZNF546Q86UE3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14□□□□□ -0.17
ZNF546Q86UE3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
ZNF546Q86UE3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZNF546Q86UE3 FRMD8P1-201ENST00000440433 1524 ntBASIC14□□□□□ -0.17
ZNF546Q86UE3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms