Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 AC007064.4-201ENST00000637740 555 ntBASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 FRMD8P1-201ENST00000440433 1524 ntBASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 AL021920.2-201ENST00000624828 1351 ntBASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TTC39BQ5VTQ0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 BX842568.4-201ENST00000421222 227 ntBASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 AC004832.2-201ENST00000426397 482 ntBASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 KRT18P2-201ENST00000447938 1258 ntBASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 AC107918.2-201ENST00000530817 355 ntBASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 AC005412.3-201ENST00000580309 715 ntBASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 REXO1L3P-201ENST00000622202 1288 ntBASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC39BQ5VTQ0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 AC023141.13-201ENST00000604991 943 ntBASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 AC023511.2-201ENST00000618803 211 ntBASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 TOP3BP1-201ENST00000420768 1380 ntBASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC39BQ5VTQ0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms