Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LRRC38Q5VT99 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 LINC01144-201ENST00000626198 1710 ntBASIC17.41■□□□□ 0.38
LRRC38Q5VT99 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 PCDH8P1-201ENST00000428983 2773 ntBASIC17.41■□□□□ 0.38
LRRC38Q5VT99 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 RPS2P28-201ENST00000314255 741 ntBASIC17.41■□□□□ 0.38
LRRC38Q5VT99 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 KRT18P67-201ENST00000432816 1264 ntBASIC17.41■□□□□ 0.38
LRRC38Q5VT99 EMBP1-201ENST00000458200 901 ntBASIC17.41■□□□□ 0.38
LRRC38Q5VT99 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.41■□□□□ 0.38
LRRC38Q5VT99 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRRC38Q5VT99 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 POU5F1P6-201ENST00000466990 990 ntBASIC17.4■□□□□ 0.38
LRRC38Q5VT99 AF186996.4-201ENST00000467186 377 ntBASIC17.4■□□□□ 0.38
LRRC38Q5VT99 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 AC005593.1-201ENST00000624894 515 ntBASIC17.4■□□□□ 0.38
LRRC38Q5VT99 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC38Q5VT99 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC38Q5VT99 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC38Q5VT99 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC38Q5VT99 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC38Q5VT99 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LRRC38Q5VT99 AC022188.1-201ENST00000620960 1664 ntBASIC17.39■□□□□ 0.37
LRRC38Q5VT99 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 MRPL20P1-201ENST00000400819 433 ntBASIC17.39■□□□□ 0.37
LRRC38Q5VT99 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC38Q5VT99 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms