Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.67■□□□□ 0.1
RFX4Q33E94 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.67■□□□□ 0.1
RFX4Q33E94 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.67■□□□□ 0.1
RFX4Q33E94 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 FAM220CP-201ENST00000395253 831 ntBASIC15.67■□□□□ 0.1
RFX4Q33E94 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 AL671277.2-201ENST00000458060 996 ntBASIC15.67■□□□□ 0.1
RFX4Q33E94 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX4Q33E94 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.67■□□□□ 0.1
RFX4Q33E94 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.67■□□□□ 0.1
RFX4Q33E94 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 AC090616.6-201ENST00000582640 721 ntBASIC15.67■□□□□ 0.1
RFX4Q33E94 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.67■□□□□ 0.1
RFX4Q33E94 AL592071.1-201ENST00000611956 408 ntBASIC15.67■□□□□ 0.1
RFX4Q33E94 IGHV3-41-201ENST00000613121 348 ntBASIC15.67■□□□□ 0.1
RFX4Q33E94 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFX4Q33E94 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFX4Q33E94 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 KRT8P10-201ENST00000450021 1447 ntBASIC15.67■□□□□ 0.1
RFX4Q33E94 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFX4Q33E94 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RFX4Q33E94 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RFX4Q33E94 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RFX4Q33E94 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RFX4Q33E94 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RFX4Q33E94 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX4Q33E94 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX4Q33E94 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RFX4Q33E94 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RFX4Q33E94 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 AC011840.4-201ENST00000578471 627 ntBASIC15.66■□□□□ 0.1
RFX4Q33E94 AC005336.2-201ENST00000593183 939 ntBASIC15.66■□□□□ 0.1
RFX4Q33E94 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX4Q33E94 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RFX4Q33E94 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX4Q33E94 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.66■□□□□ 0.1
RFX4Q33E94 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.66■□□□□ 0.1
RFX4Q33E94 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.66■□□□□ 0.1
RFX4Q33E94 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX4Q33E94 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RFX4Q33E94 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 NORAD-201ENST00000565493 5339 ntBASIC15.66■□□□□ 0.1
RFX4Q33E94 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RFX4Q33E94 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX4Q33E94 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RFX4Q33E94 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.66■□□□□ 0.1
RFX4Q33E94 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.66■□□□□ 0.1
RFX4Q33E94 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX4Q33E94 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX4Q33E94 AL596087.1-201ENST00000400979 1969 ntBASIC15.66■□□□□ 0.1
RFX4Q33E94 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms