Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.16■□□□□ 0.66
HTRA3P83110 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.16■□□□□ 0.66
HTRA3P83110 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.16■□□□□ 0.66
HTRA3P83110 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.16■□□□□ 0.66
HTRA3P83110 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTRA3P83110 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HTRA3P83110 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HTRA3P83110 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.15■□□□□ 0.66
HTRA3P83110 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTRA3P83110 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTRA3P83110 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HTRA3P83110 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.15■□□□□ 0.66
HTRA3P83110 SOCS2P1-201ENST00000417727 557 ntBASIC19.15■□□□□ 0.66
HTRA3P83110 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.15■□□□□ 0.66
HTRA3P83110 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.15■□□□□ 0.66
HTRA3P83110 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.15■□□□□ 0.66
HTRA3P83110 RN7SL720P-201ENST00000488178 304 ntBASIC19.15■□□□□ 0.66
HTRA3P83110 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.15■□□□□ 0.66
HTRA3P83110 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
HTRA3P83110 MIR3147-201ENST00000577811 66 ntBASIC19.15■□□□□ 0.66
HTRA3P83110 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.15■□□□□ 0.66
HTRA3P83110 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTRA3P83110 AC074044.1-201ENST00000609673 707 ntBASIC19.15■□□□□ 0.66
HTRA3P83110 AC091812.3-201ENST00000621362 345 ntBASIC19.15■□□□□ 0.66
HTRA3P83110 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.15■□□□□ 0.66
HTRA3P83110 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTRA3P83110 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HTRA3P83110 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTRA3P83110 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTRA3P83110 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HTRA3P83110 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HTRA3P83110 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HTRA3P83110 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.14■□□□□ 0.66
HTRA3P83110 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.14■□□□□ 0.65
HTRA3P83110 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
HTRA3P83110 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
HTRA3P83110 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC19.14■□□□□ 0.65
HTRA3P83110 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HTRA3P83110 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.14■□□□□ 0.65
HTRA3P83110 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.14■□□□□ 0.65
HTRA3P83110 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.14■□□□□ 0.65
HTRA3P83110 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.14■□□□□ 0.65
HTRA3P83110 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.14■□□□□ 0.65
HTRA3P83110 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.14■□□□□ 0.65
HTRA3P83110 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.14■□□□□ 0.65
HTRA3P83110 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HTRA3P83110 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.14■□□□□ 0.65
HTRA3P83110 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTRA3P83110 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
HTRA3P83110 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.13■□□□□ 0.65
HTRA3P83110 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.13■□□□□ 0.65
HTRA3P83110 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HTRA3P83110 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC19.13■□□□□ 0.65
HTRA3P83110 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.13■□□□□ 0.65
HTRA3P83110 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC19.13■□□□□ 0.65
HTRA3P83110 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.13■□□□□ 0.65
HTRA3P83110 AC104982.3-201ENST00000581995 514 ntBASIC19.13■□□□□ 0.65
HTRA3P83110 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC19.13■□□□□ 0.65
HTRA3P83110 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 AHCYP2-201ENST00000430630 1300 ntBASIC19.13■□□□□ 0.65
HTRA3P83110 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HTRA3P83110 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.13■□□□□ 0.65
HTRA3P83110 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
HTRA3P83110 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms