Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CXCL1P1-201ENST00000502804 216 ntBASIC17.36■□□□□ 0.37
COPAP53621 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
COPAP53621 AL031432.2-201ENST00000566714 459 ntBASIC17.36■□□□□ 0.37
COPAP53621 AL928711.1-201ENST00000570165 459 ntBASIC17.36■□□□□ 0.37
COPAP53621 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
COPAP53621 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPAP53621 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPAP53621 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.36■□□□□ 0.37
COPAP53621 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.36■□□□□ 0.37
COPAP53621 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
COPAP53621 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.36■□□□□ 0.37
COPAP53621 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPAP53621 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COPAP53621 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
COPAP53621 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COPAP53621 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 AGGF1P2-201ENST00000426656 2106 ntBASIC17.35■□□□□ 0.37
COPAP53621 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.35■□□□□ 0.37
COPAP53621 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.35■□□□□ 0.37
COPAP53621 CEND1P1-201ENST00000451006 455 ntBASIC17.35■□□□□ 0.37
COPAP53621 AC074386.1-202ENST00000463561 864 ntBASIC17.35■□□□□ 0.37
COPAP53621 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.35■□□□□ 0.37
COPAP53621 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.35■□□□□ 0.37
COPAP53621 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
COPAP53621 SNHG9-202ENST00000564014 471 ntBASIC17.35■□□□□ 0.37
COPAP53621 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
COPAP53621 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.35■□□□□ 0.37
COPAP53621 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 AC023141.13-201ENST00000604991 943 ntBASIC17.35■□□□□ 0.37
COPAP53621 AC007064.4-201ENST00000637740 555 ntBASIC17.35■□□□□ 0.37
COPAP53621 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.35■□□□□ 0.37
COPAP53621 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
COPAP53621 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
COPAP53621 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COPAP53621 PCDHA14-201ENST00000506751 2298 ntBASIC17.35■□□□□ 0.37
COPAP53621 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.35■□□□□ 0.37
COPAP53621 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.35■□□□□ 0.37
COPAP53621 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
COPAP53621 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
COPAP53621 AC008894.3-201ENST00000624324 3103 ntBASIC17.34■□□□□ 0.37
COPAP53621 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
COPAP53621 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.34■□□□□ 0.37
COPAP53621 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.34■□□□□ 0.37
COPAP53621 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.34■□□□□ 0.37
COPAP53621 HMGN1P19-201ENST00000436976 333 ntBASIC17.34■□□□□ 0.37
COPAP53621 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.34■□□□□ 0.37
COPAP53621 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.34■□□□□ 0.37
COPAP53621 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.34■□□□□ 0.37
COPAP53621 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.34■□□□□ 0.37
COPAP53621 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.34■□□□□ 0.37
COPAP53621 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
COPAP53621 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 AL355385.1-201ENST00000606123 409 ntBASIC17.34■□□□□ 0.37
COPAP53621 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.34■□□□□ 0.37
COPAP53621 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.34■□□□□ 0.37
COPAP53621 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.34■□□□□ 0.37
COPAP53621 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COPAP53621 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPAP53621 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPAP53621 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPAP53621 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
COPAP53621 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPAP53621 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.33■□□□□ 0.37
COPAP53621 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COPAP53621 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COPAP53621 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.33■□□□□ 0.37
COPAP53621 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.33■□□□□ 0.36
COPAP53621 PCDH8P1-201ENST00000428983 2773 ntBASIC17.33■□□□□ 0.36
COPAP53621 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COPAP53621 KRT18P28-201ENST00000453838 1332 ntBASIC17.33■□□□□ 0.36
COPAP53621 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms