Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NUBP1P53384 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.7■□□□□ 0.26
NUBP1P53384 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NUBP1P53384 TOP3BP1-201ENST00000420768 1380 ntBASIC16.7■□□□□ 0.26
NUBP1P53384 AC083799.1-201ENST00000366451 910 ntBASIC16.7■□□□□ 0.26
NUBP1P53384 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.7■□□□□ 0.26
NUBP1P53384 AC246787.1-201ENST00000392301 627 ntBASIC16.7■□□□□ 0.26
NUBP1P53384 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 TMEM14DP-201ENST00000422205 345 ntBASIC16.7■□□□□ 0.26
NUBP1P53384 AL513285.1-201ENST00000423187 432 ntTSL 3 BASIC16.7■□□□□ 0.26
NUBP1P53384 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.7■□□□□ 0.26
NUBP1P53384 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.7■□□□□ 0.26
NUBP1P53384 AC096732.1-201ENST00000439565 477 ntTSL 3 BASIC16.7■□□□□ 0.26
NUBP1P53384 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.7■□□□□ 0.26
NUBP1P53384 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.7■□□□□ 0.26
NUBP1P53384 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NUBP1P53384 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NUBP1P53384 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC16.7■□□□□ 0.26
NUBP1P53384 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NUBP1P53384 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.7■□□□□ 0.26
NUBP1P53384 CTBP2P3-201ENST00000585629 1255 ntBASIC16.7■□□□□ 0.26
NUBP1P53384 AC106872.11-201ENST00000605838 421 ntBASIC16.7■□□□□ 0.26
NUBP1P53384 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NUBP1P53384 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NUBP1P53384 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
NUBP1P53384 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.7■□□□□ 0.26
NUBP1P53384 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NUBP1P53384 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NUBP1P53384 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.69■□□□□ 0.26
NUBP1P53384 GOLGA2P4-201ENST00000441462 777 ntBASIC16.69■□□□□ 0.26
NUBP1P53384 MTATP6P26-201ENST00000445926 662 ntBASIC16.69■□□□□ 0.26
NUBP1P53384 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.69■□□□□ 0.26
NUBP1P53384 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
NUBP1P53384 SDHAP3-202ENST00000515467 728 ntBASIC16.69■□□□□ 0.26
NUBP1P53384 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.69■□□□□ 0.26
NUBP1P53384 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC16.69■□□□□ 0.26
NUBP1P53384 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC16.69■□□□□ 0.26
NUBP1P53384 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.69■□□□□ 0.26
NUBP1P53384 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.69■□□□□ 0.26
NUBP1P53384 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NUBP1P53384 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.69■□□□□ 0.26
NUBP1P53384 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.69■□□□□ 0.26
NUBP1P53384 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.69■□□□□ 0.26
NUBP1P53384 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.69■□□□□ 0.26
NUBP1P53384 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.69■□□□□ 0.26
NUBP1P53384 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.69■□□□□ 0.26
NUBP1P53384 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
NUBP1P53384 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NUBP1P53384 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 AC073592.3-201ENST00000625118 1834 ntBASIC16.68■□□□□ 0.26
NUBP1P53384 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.68■□□□□ 0.26
NUBP1P53384 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NUBP1P53384 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NUBP1P53384 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 OR6K3-202ENST00000368146 996 ntBASIC16.68■□□□□ 0.26
NUBP1P53384 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.68■□□□□ 0.26
NUBP1P53384 MTND4P11-201ENST00000417020 1058 ntBASIC16.68■□□□□ 0.26
NUBP1P53384 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.68■□□□□ 0.26
NUBP1P53384 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.68■□□□□ 0.26
NUBP1P53384 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.68■□□□□ 0.26
NUBP1P53384 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 PRYP6-201ENST00000514804 343 ntBASIC16.68■□□□□ 0.26
NUBP1P53384 RNU6-415P-201ENST00000516252 97 ntBASIC16.68■□□□□ 0.26
NUBP1P53384 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NUBP1P53384 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.68■□□□□ 0.26
NUBP1P53384 AC239868.3-201ENST00000577853 1234 ntBASIC16.68■□□□□ 0.26
NUBP1P53384 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.68■□□□□ 0.26
NUBP1P53384 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 AL033527.5-201ENST00000641382 801 ntBASIC16.68■□□□□ 0.26
NUBP1P53384 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NUBP1P53384 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.68■□□□□ 0.26
NUBP1P53384 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.68■□□□□ 0.26
NUBP1P53384 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms