Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.64■□□□□ 0.57
LBX1P52954 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.64■□□□□ 0.57
LBX1P52954 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.64■□□□□ 0.57
LBX1P52954 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.64■□□□□ 0.57
LBX1P52954 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
LBX1P52954 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.64■□□□□ 0.57
LBX1P52954 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.64■□□□□ 0.57
LBX1P52954 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.64■□□□□ 0.57
LBX1P52954 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.64■□□□□ 0.57
LBX1P52954 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.64■□□□□ 0.57
LBX1P52954 KRT18P66-201ENST00000452970 1269 ntBASIC18.64■□□□□ 0.57
LBX1P52954 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LBX1P52954 AC104784.1-201ENST00000473096 294 ntBASIC18.64■□□□□ 0.57
LBX1P52954 IQSEC3P1-201ENST00000538799 536 ntBASIC18.64■□□□□ 0.57
LBX1P52954 AC104982.3-201ENST00000581995 514 ntBASIC18.64■□□□□ 0.57
LBX1P52954 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.64■□□□□ 0.57
LBX1P52954 NDUFV2P1-201ENST00000596415 907 ntBASIC18.64■□□□□ 0.57
LBX1P52954 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.64■□□□□ 0.57
LBX1P52954 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.64■□□□□ 0.57
LBX1P52954 AL049840.4-201ENST00000602422 811 ntBASIC18.64■□□□□ 0.57
LBX1P52954 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.64■□□□□ 0.57
LBX1P52954 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.64■□□□□ 0.57
LBX1P52954 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
LBX1P52954 AC148477.9-201ENST00000623974 539 ntBASIC18.64■□□□□ 0.57
LBX1P52954 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LBX1P52954 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LBX1P52954 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LBX1P52954 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LBX1P52954 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.64■□□□□ 0.57
LBX1P52954 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LBX1P52954 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.64■□□□□ 0.57
LBX1P52954 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
LBX1P52954 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.63■□□□□ 0.57
LBX1P52954 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.63■□□□□ 0.57
LBX1P52954 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LBX1P52954 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.63■□□□□ 0.57
LBX1P52954 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LBX1P52954 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LBX1P52954 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LBX1P52954 AC106760.1-201ENST00000508690 800 ntBASIC18.63■□□□□ 0.57
LBX1P52954 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.63■□□□□ 0.57
LBX1P52954 RN7SL555P-201ENST00000584742 339 ntBASIC18.63■□□□□ 0.57
LBX1P52954 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LBX1P52954 AC018635.2-201ENST00000608625 364 ntBASIC18.63■□□□□ 0.57
LBX1P52954 AHCYP2-201ENST00000430630 1300 ntBASIC18.63■□□□□ 0.57
LBX1P52954 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LBX1P52954 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
LBX1P52954 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LBX1P52954 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.63■□□□□ 0.57
LBX1P52954 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LBX1P52954 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LBX1P52954 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.62■□□□□ 0.57
LBX1P52954 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LBX1P52954 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LBX1P52954 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LBX1P52954 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LBX1P52954 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LBX1P52954 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.62■□□□□ 0.57
LBX1P52954 AL133466.1-201ENST00000447582 150 ntBASIC18.62■□□□□ 0.57
LBX1P52954 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LBX1P52954 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.62■□□□□ 0.57
LBX1P52954 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.62■□□□□ 0.57
LBX1P52954 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.62■□□□□ 0.57
LBX1P52954 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.62■□□□□ 0.57
LBX1P52954 AC134312.5-201ENST00000568031 1313 ntBASIC18.62■□□□□ 0.57
LBX1P52954 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LBX1P52954 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LBX1P52954 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LBX1P52954 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LBX1P52954 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LBX1P52954 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
LBX1P52954 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 AP000997.3-201ENST00000623333 2250 ntBASIC18.61■□□□□ 0.57
LBX1P52954 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
LBX1P52954 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LBX1P52954 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms