Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN2P51788 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.33■□□□□ 0.2
CLCN2P51788 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CLCN2P51788 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLCN2P51788 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN2P51788 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.33■□□□□ 0.2
CLCN2P51788 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN2P51788 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN2P51788 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.33■□□□□ 0.2
CLCN2P51788 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CLCN2P51788 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.33■□□□□ 0.2
CLCN2P51788 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.33■□□□□ 0.2
CLCN2P51788 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLCN2P51788 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN2P51788 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN2P51788 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN2P51788 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN2P51788 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLCN2P51788 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN2P51788 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN2P51788 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN2P51788 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CLCN2P51788 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.32■□□□□ 0.2
CLCN2P51788 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLCN2P51788 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN2P51788 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN2P51788 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN2P51788 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 SLC25A6P4-201ENST00000586535 553 ntBASIC16.32■□□□□ 0.2
CLCN2P51788 AL773604.1-201ENST00000617417 272 ntBASIC16.32■□□□□ 0.2
CLCN2P51788 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN2P51788 MTHFR-217ENST00000641820 1569 ntBASIC16.32■□□□□ 0.2
CLCN2P51788 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CLCN2P51788 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN2P51788 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCN2P51788 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN2P51788 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN2P51788 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLCN2P51788 AC079776.2-201ENST00000641154 1609 ntBASIC16.31■□□□□ 0.2
CLCN2P51788 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN2P51788 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLCN2P51788 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN2P51788 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN2P51788 MYCLP1-201ENST00000372451 1075 ntBASIC16.31■□□□□ 0.2
CLCN2P51788 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 MRPL3P1-201ENST00000400109 1033 ntBASIC16.31■□□□□ 0.2
CLCN2P51788 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN2P51788 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN2P51788 RNPS1P1-201ENST00000507437 918 ntBASIC16.31■□□□□ 0.2
CLCN2P51788 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN2P51788 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.31■□□□□ 0.2
CLCN2P51788 SART3-203ENST00000546611 1184 ntBASIC16.31■□□□□ 0.2
CLCN2P51788 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CLCN2P51788 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN2P51788 NKAPP1-205ENST00000585790 367 ntBASIC16.31■□□□□ 0.2
CLCN2P51788 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.31■□□□□ 0.2
CLCN2P51788 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLCN2P51788 AC019129.2-201ENST00000609837 1235 ntBASIC16.31■□□□□ 0.2
CLCN2P51788 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.31■□□□□ 0.2
CLCN2P51788 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.31■□□□□ 0.2
CLCN2P51788 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLCN2P51788 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CLCN2P51788 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN2P51788 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN2P51788 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms