Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.92■□□□□ 0.62
USP11P51784 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
USP11P51784 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 AKAP8P1-201ENST00000434743 1349 ntBASIC18.92■□□□□ 0.62
USP11P51784 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 AGGF1P2-201ENST00000426656 2106 ntBASIC18.92■□□□□ 0.62
USP11P51784 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP11P51784 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
USP11P51784 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
USP11P51784 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
USP11P51784 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.91■□□□□ 0.62
USP11P51784 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
USP11P51784 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
USP11P51784 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 HLA-A-202ENST00000376806 1854 ntBASIC18.91■□□□□ 0.62
USP11P51784 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.91■□□□□ 0.62
USP11P51784 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.91■□□□□ 0.62
USP11P51784 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.91■□□□□ 0.62
USP11P51784 ADH5P3-201ENST00000433842 1137 ntBASIC18.91■□□□□ 0.62
USP11P51784 CEND1P1-201ENST00000451006 455 ntBASIC18.91■□□□□ 0.62
USP11P51784 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
USP11P51784 RARRES2P8-201ENST00000566335 367 ntBASIC18.91■□□□□ 0.62
USP11P51784 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USP11P51784 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.91■□□□□ 0.62
USP11P51784 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.91■□□□□ 0.62
USP11P51784 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
USP11P51784 AC055717.3-201ENST00000622967 595 ntBASIC18.91■□□□□ 0.62
USP11P51784 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
USP11P51784 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
USP11P51784 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.91■□□□□ 0.62
USP11P51784 AC084018.2-201ENST00000613093 2607 ntBASIC18.91■□□□□ 0.62
USP11P51784 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USP11P51784 WASH6P-202ENST00000359512 1437 ntBASIC18.91■□□□□ 0.62
USP11P51784 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP11P51784 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.9■□□□□ 0.62
USP11P51784 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.9■□□□□ 0.62
USP11P51784 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.9■□□□□ 0.62
USP11P51784 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.9■□□□□ 0.62
USP11P51784 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
USP11P51784 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 AL355306.1-201ENST00000415580 579 ntBASIC18.9■□□□□ 0.62
USP11P51784 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.9■□□□□ 0.62
USP11P51784 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.9■□□□□ 0.62
USP11P51784 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.9■□□□□ 0.62
USP11P51784 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
USP11P51784 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.9■□□□□ 0.62
USP11P51784 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
USP11P51784 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.9■□□□□ 0.62
USP11P51784 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
USP11P51784 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
USP11P51784 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP11P51784 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.9■□□□□ 0.62
USP11P51784 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
USP11P51784 AL031731.1-201ENST00000642131 2094 ntBASIC18.89■□□□□ 0.62
USP11P51784 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.89■□□□□ 0.62
USP11P51784 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP11P51784 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USP11P51784 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP11P51784 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP11P51784 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP11P51784 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP11P51784 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms