Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.08■□□□□ 0.96
COL15A1P39059 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
COL15A1P39059 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.08■□□□□ 0.96
COL15A1P39059 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.08■□□□□ 0.96
COL15A1P39059 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
COL15A1P39059 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.08■□□□□ 0.96
COL15A1P39059 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.07■□□□□ 0.96
COL15A1P39059 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
COL15A1P39059 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.07■□□□□ 0.96
COL15A1P39059 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL15A1P39059 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COL15A1P39059 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 MTND6P24-201ENST00000440466 518 ntBASIC21.07■□□□□ 0.96
COL15A1P39059 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.07■□□□□ 0.96
COL15A1P39059 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.07■□□□□ 0.96
COL15A1P39059 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.07■□□□□ 0.96
COL15A1P39059 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.07■□□□□ 0.96
COL15A1P39059 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.07■□□□□ 0.96
COL15A1P39059 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.07■□□□□ 0.96
COL15A1P39059 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.07■□□□□ 0.96
COL15A1P39059 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.07■□□□□ 0.96
COL15A1P39059 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
COL15A1P39059 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
COL15A1P39059 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL15A1P39059 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
COL15A1P39059 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.06■□□□□ 0.96
COL15A1P39059 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL15A1P39059 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.06■□□□□ 0.96
COL15A1P39059 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.06■□□□□ 0.96
COL15A1P39059 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.06■□□□□ 0.96
COL15A1P39059 AC140912.1-201ENST00000577171 1054 ntBASIC21.06■□□□□ 0.96
COL15A1P39059 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.06■□□□□ 0.96
COL15A1P39059 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.06■□□□□ 0.96
COL15A1P39059 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.06■□□□□ 0.96
COL15A1P39059 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.06■□□□□ 0.96
COL15A1P39059 AL589739.1-201ENST00000607720 493 ntBASIC21.06■□□□□ 0.96
COL15A1P39059 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.06■□□□□ 0.96
COL15A1P39059 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.06■□□□□ 0.96
COL15A1P39059 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.06■□□□□ 0.96
COL15A1P39059 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.06■□□□□ 0.96
COL15A1P39059 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.06■□□□□ 0.96
COL15A1P39059 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL15A1P39059 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.06■□□□□ 0.96
COL15A1P39059 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.05■□□□□ 0.96
COL15A1P39059 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.05■□□□□ 0.96
COL15A1P39059 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.05■□□□□ 0.96
COL15A1P39059 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.05■□□□□ 0.96
COL15A1P39059 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
COL15A1P39059 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL15A1P39059 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL15A1P39059 U91328.1-201ENST00000437528 223 ntBASIC21.05■□□□□ 0.96
COL15A1P39059 KRT17P7-201ENST00000451704 1104 ntBASIC21.05■□□□□ 0.96
COL15A1P39059 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.05■□□□□ 0.96
COL15A1P39059 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.05■□□□□ 0.96
COL15A1P39059 TP53TG3HP-202ENST00000569755 579 ntBASIC21.05■□□□□ 0.96
COL15A1P39059 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.05■□□□□ 0.96
COL15A1P39059 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.05■□□□□ 0.96
COL15A1P39059 RN7SL828P-201ENST00000607615 303 ntBASIC21.05■□□□□ 0.96
COL15A1P39059 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.05■□□□□ 0.96
COL15A1P39059 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.05■□□□□ 0.96
COL15A1P39059 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.05■□□□□ 0.96
COL15A1P39059 SPTSSB-204ENST00000617024 1292 ntBASIC21.05■□□□□ 0.96
COL15A1P39059 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms