Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 AC093028.1-201ENST00000622998 982 ntBASIC15.94■□□□□ 0.14
RORAP35398 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.94■□□□□ 0.14
RORAP35398 AC108860.2-201ENST00000562760 2183 ntBASIC15.94■□□□□ 0.14
RORAP35398 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
RORAP35398 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RORAP35398 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RORAP35398 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.94■□□□□ 0.14
RORAP35398 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RORAP35398 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.93■□□□□ 0.14
RORAP35398 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RORAP35398 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
RORAP35398 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RORAP35398 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.93■□□□□ 0.14
RORAP35398 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.93■□□□□ 0.14
RORAP35398 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.93■□□□□ 0.14
RORAP35398 TFAMP1-201ENST00000412727 736 ntBASIC15.93■□□□□ 0.14
RORAP35398 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RORAP35398 SPDYE11-202ENST00000450699 704 ntBASIC15.93■□□□□ 0.14
RORAP35398 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.93■□□□□ 0.14
RORAP35398 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.93■□□□□ 0.14
RORAP35398 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 RN7SL589P-201ENST00000481268 310 ntBASIC15.93■□□□□ 0.14
RORAP35398 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
RORAP35398 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.93■□□□□ 0.14
RORAP35398 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.93■□□□□ 0.14
RORAP35398 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.93■□□□□ 0.14
RORAP35398 SPDYE9P-201ENST00000570642 692 ntBASIC15.93■□□□□ 0.14
RORAP35398 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 SPDYE10P-202ENST00000612005 668 ntBASIC15.93■□□□□ 0.14
RORAP35398 SPDYE8P-202ENST00000612377 668 ntBASIC15.93■□□□□ 0.14
RORAP35398 AL161645.1-201ENST00000622716 1255 ntBASIC15.93■□□□□ 0.14
RORAP35398 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.93■□□□□ 0.14
RORAP35398 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 AC009053.2-201ENST00000563701 2365 ntBASIC15.93■□□□□ 0.14
RORAP35398 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RORAP35398 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RORAP35398 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RORAP35398 AKAP8P1-201ENST00000434743 1349 ntBASIC15.93■□□□□ 0.14
RORAP35398 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RORAP35398 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RORAP35398 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.92■□□□□ 0.14
RORAP35398 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
RORAP35398 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.92■□□□□ 0.14
RORAP35398 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.92■□□□□ 0.14
RORAP35398 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 FER1L4-210ENST00000615531 5998 ntBASIC15.92■□□□□ 0.14
RORAP35398 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RORAP35398 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.92■□□□□ 0.14
RORAP35398 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RORAP35398 AL627223.1-201ENST00000416693 442 ntBASIC15.92■□□□□ 0.14
RORAP35398 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.92■□□□□ 0.14
RORAP35398 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.92■□□□□ 0.14
RORAP35398 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.92■□□□□ 0.14
RORAP35398 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.92■□□□□ 0.14
RORAP35398 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.92■□□□□ 0.14
RORAP35398 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
RORAP35398 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.92■□□□□ 0.14
RORAP35398 AC243562.1-201ENST00000560672 389 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms