Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFSF4P23510 AC009053.2-201ENST00000563701 2365 ntBASIC14.38□□□□□ -0.11
TNFSF4P23510 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFSF4P23510 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TNFSF4P23510 HCG4-201ENST00000418983 998 ntBASIC14.38□□□□□ -0.11
TNFSF4P23510 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.38□□□□□ -0.11
TNFSF4P23510 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFSF4P23510 FAM185BP-201ENST00000443595 716 ntBASIC14.38□□□□□ -0.11
TNFSF4P23510 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.38□□□□□ -0.11
TNFSF4P23510 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.38□□□□□ -0.11
TNFSF4P23510 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
TNFSF4P23510 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.38□□□□□ -0.11
TNFSF4P23510 AC063926.3-201ENST00000624734 5658 ntBASIC14.38□□□□□ -0.11
TNFSF4P23510 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TNFSF4P23510 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFSF4P23510 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TNFSF4P23510 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.38□□□□□ -0.11
TNFSF4P23510 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.38□□□□□ -0.11
TNFSF4P23510 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
TNFSF4P23510 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNFSF4P23510 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TNFSF4P23510 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFSF4P23510 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFSF4P23510 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TNFSF4P23510 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 AL645608.8-201ENST00000606034 2086 ntBASIC14.37□□□□□ -0.11
TNFSF4P23510 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFSF4P23510 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFSF4P23510 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
TNFSF4P23510 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFSF4P23510 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TNFSF4P23510 POLD2P1-201ENST00000511220 997 ntBASIC14.37□□□□□ -0.11
TNFSF4P23510 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.37□□□□□ -0.11
TNFSF4P23510 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TNFSF4P23510 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TNFSF4P23510 AC002347.1-201ENST00000569543 541 ntBASIC14.37□□□□□ -0.11
TNFSF4P23510 OR7E47P-204ENST00000575924 449 ntBASIC14.37□□□□□ -0.11
TNFSF4P23510 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TNFSF4P23510 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFSF4P23510 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFSF4P23510 AL645728.2-201ENST00000641974 660 ntBASIC14.37□□□□□ -0.11
TNFSF4P23510 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TNFSF4P23510 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFSF4P23510 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFSF4P23510 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFSF4P23510 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFSF4P23510 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TNFSF4P23510 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFSF4P23510 MIR600HG-201ENST00000449175 5984 ntBASIC14.37□□□□□ -0.11
TNFSF4P23510 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TNFSF4P23510 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFSF4P23510 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFSF4P23510 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFSF4P23510 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TNFSF4P23510 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFSF4P23510 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms