Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGA6P23229 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGA6P23229 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ITGA6P23229 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGA6P23229 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ITGA6P23229 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ITGA6P23229 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
ITGA6P23229 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGA6P23229 BASP1P1-201ENST00000430708 665 ntBASIC20.55■□□□□ 0.88
ITGA6P23229 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGA6P23229 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.55■□□□□ 0.88
ITGA6P23229 AJ011932.1-201ENST00000621707 465 ntBASIC20.55■□□□□ 0.88
ITGA6P23229 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.55■□□□□ 0.88
ITGA6P23229 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ITGA6P23229 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ITGA6P23229 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.55■□□□□ 0.88
ITGA6P23229 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ITGA6P23229 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ITGA6P23229 AC005332.8-201ENST00000622750 2735 ntBASIC20.55■□□□□ 0.88
ITGA6P23229 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ITGA6P23229 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.54■□□□□ 0.88
ITGA6P23229 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ITGA6P23229 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 MIR4745-201ENST00000577608 62 ntBASIC20.54■□□□□ 0.88
ITGA6P23229 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGA6P23229 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGA6P23229 AL158211.3-201ENST00000607385 239 ntBASIC20.54■□□□□ 0.88
ITGA6P23229 AC018529.1-201ENST00000613063 361 ntBASIC20.54■□□□□ 0.88
ITGA6P23229 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGA6P23229 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ITGA6P23229 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGA6P23229 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ITGA6P23229 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGA6P23229 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ITGA6P23229 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ITGA6P23229 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.54■□□□□ 0.88
ITGA6P23229 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 AL512652.2-201ENST00000625156 1716 ntBASIC20.53■□□□□ 0.88
ITGA6P23229 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ITGA6P23229 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ITGA6P23229 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ITGA6P23229 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.53■□□□□ 0.88
ITGA6P23229 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.53■□□□□ 0.88
ITGA6P23229 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ITGA6P23229 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 INGX-202ENST00000489074 768 ntBASIC20.53■□□□□ 0.88
ITGA6P23229 AC097493.3-201ENST00000509725 367 ntBASIC20.53■□□□□ 0.88
ITGA6P23229 AC069120.2-201ENST00000524091 540 ntBASIC20.53■□□□□ 0.88
ITGA6P23229 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.53■□□□□ 0.88
ITGA6P23229 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.53■□□□□ 0.88
ITGA6P23229 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.53■□□□□ 0.88
ITGA6P23229 AL390754.1-201ENST00000619088 582 ntBASIC20.53■□□□□ 0.88
ITGA6P23229 AL139011.1-202ENST00000642063 584 ntBASIC20.53■□□□□ 0.88
ITGA6P23229 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.53■□□□□ 0.88
ITGA6P23229 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.53■□□□□ 0.88
ITGA6P23229 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ITGA6P23229 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
ITGA6P23229 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms