Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFRSF1BP20333 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 ABCD1P5-201ENST00000445663 754 ntBASIC15.65■□□□□ 0.1
TNFRSF1BP20333 AC087388.1-201ENST00000571370 1112 ntBASIC15.65■□□□□ 0.1
TNFRSF1BP20333 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 SIGLEC16-201ENST00000599858 1437 ntBASIC15.65■□□□□ 0.1
TNFRSF1BP20333 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 AC024909.3-201ENST00000611513 2257 ntBASIC15.65■□□□□ 0.1
TNFRSF1BP20333 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFRSF1BP20333 AC079776.2-201ENST00000641154 1609 ntBASIC15.65■□□□□ 0.1
TNFRSF1BP20333 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.1
TNFRSF1BP20333 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.64■□□□□ 0.1
TNFRSF1BP20333 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 BX005266.1-201ENST00000473402 457 ntBASIC15.64■□□□□ 0.09
TNFRSF1BP20333 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 KRT8P49-201ENST00000604166 1432 ntBASIC15.64■□□□□ 0.09
TNFRSF1BP20333 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 AL590787.1-201ENST00000568856 1315 ntBASIC15.64■□□□□ 0.09
TNFRSF1BP20333 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFRSF1BP20333 AC022188.1-201ENST00000620960 1664 ntBASIC15.63■□□□□ 0.09
TNFRSF1BP20333 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TNFRSF1BP20333 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms