Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.78■□□□□ 0.44
CHRNB2P17787 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNB2P17787 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.78■□□□□ 0.44
CHRNB2P17787 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.78■□□□□ 0.44
CHRNB2P17787 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNB2P17787 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNB2P17787 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.78■□□□□ 0.44
CHRNB2P17787 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHRNB2P17787 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CHRNB2P17787 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRNB2P17787 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHRNB2P17787 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRNB2P17787 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CHRNB2P17787 HCG4-201ENST00000418983 998 ntBASIC17.77■□□□□ 0.44
CHRNB2P17787 AC009947.1-201ENST00000444350 727 ntBASIC17.77■□□□□ 0.44
CHRNB2P17787 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 AC108751.1-201ENST00000490852 363 ntBASIC17.77■□□□□ 0.44
CHRNB2P17787 UNC93B6-202ENST00000528242 690 ntBASIC17.77■□□□□ 0.44
CHRNB2P17787 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.77■□□□□ 0.44
CHRNB2P17787 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRNB2P17787 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHRNB2P17787 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRNB2P17787 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CHRNB2P17787 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.77■□□□□ 0.44
CHRNB2P17787 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.77■□□□□ 0.44
CHRNB2P17787 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.77■□□□□ 0.44
CHRNB2P17787 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNB2P17787 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.77■□□□□ 0.43
CHRNB2P17787 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHRNB2P17787 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRNB2P17787 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHRNB2P17787 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRNB2P17787 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRNB2P17787 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
CHRNB2P17787 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRNB2P17787 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHRNB2P17787 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.77■□□□□ 0.43
CHRNB2P17787 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CHRNB2P17787 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.77■□□□□ 0.43
CHRNB2P17787 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRNB2P17787 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
CHRNB2P17787 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHRNB2P17787 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHRNB2P17787 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHRNB2P17787 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNB2P17787 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRNB2P17787 LINC02199-201ENST00000506655 2702 ntBASIC17.76■□□□□ 0.43
CHRNB2P17787 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.76■□□□□ 0.43
CHRNB2P17787 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 IGLL3P-201ENST00000412472 434 ntBASIC17.76■□□□□ 0.43
CHRNB2P17787 IGHV3-22-201ENST00000520721 359 ntBASIC17.76■□□□□ 0.43
CHRNB2P17787 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.76■□□□□ 0.43
CHRNB2P17787 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNB2P17787 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.76■□□□□ 0.43
CHRNB2P17787 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CHRNB2P17787 AC010654.1-201ENST00000615722 808 ntBASIC17.76■□□□□ 0.43
CHRNB2P17787 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.76■□□□□ 0.43
CHRNB2P17787 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
CHRNB2P17787 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.76■□□□□ 0.43
CHRNB2P17787 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNB2P17787 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.76■□□□□ 0.43
CHRNB2P17787 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNB2P17787 GPAA1P2-202ENST00000606848 1787 ntBASIC17.76■□□□□ 0.43
CHRNB2P17787 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRNB2P17787 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNB2P17787 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
CHRNB2P17787 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRNB2P17787 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms