Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CFTRP13569 AL139010.1-201ENST00000454878 894 ntBASIC28.21■■■□□ 2.11
CFTRP13569 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC28.21■■■□□ 2.11
CFTRP13569 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
CFTRP13569 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC28.2■■■□□ 2.11
CFTRP13569 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CFTRP13569 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CFTRP13569 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC28.2■■■□□ 2.11
CFTRP13569 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC28.2■■■□□ 2.11
CFTRP13569 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC28.2■■■□□ 2.11
CFTRP13569 Z97205.2-201ENST00000564697 1639 ntBASIC28.2■■■□□ 2.11
CFTRP13569 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC28.2■■■□□ 2.1
CFTRP13569 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC28.2■■■□□ 2.1
CFTRP13569 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
CFTRP13569 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC28.2■■■□□ 2.1
CFTRP13569 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC28.2■■■□□ 2.1
CFTRP13569 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC28.2■■■□□ 2.1
CFTRP13569 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC28.2■■■□□ 2.1
CFTRP13569 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CFTRP13569 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CFTRP13569 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CFTRP13569 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CFTRP13569 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFTRP13569 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC28.19■■■□□ 2.1
CFTRP13569 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFTRP13569 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC28.19■■■□□ 2.1
CFTRP13569 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
CFTRP13569 LBX2-201ENST00000341396 886 ntTSL 3 BASIC28.19■■■□□ 2.1
CFTRP13569 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC28.19■■■□□ 2.1
CFTRP13569 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC28.19■■■□□ 2.1
CFTRP13569 AL139099.5-201ENST00000635274 300 ntBASIC28.19■■■□□ 2.1
CFTRP13569 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC28.19■■■□□ 2.1
CFTRP13569 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFTRP13569 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFTRP13569 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC28.19■■■□□ 2.1
CFTRP13569 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CFTRP13569 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFTRP13569 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CFTRP13569 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFTRP13569 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CFTRP13569 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFTRP13569 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFTRP13569 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFTRP13569 MPV17-206ENST00000402722 827 ntTSL 3 BASIC28.18■■■□□ 2.1
CFTRP13569 AL162726.2-201ENST00000438986 1017 ntBASIC28.18■■■□□ 2.1
CFTRP13569 CSF2RBP1-201ENST00000447905 391 ntBASIC28.18■■■□□ 2.1
CFTRP13569 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC28.18■■■□□ 2.1
CFTRP13569 KLF2P4-201ENST00000451959 1225 ntBASIC28.18■■■□□ 2.1
CFTRP13569 PARP8-218ENST00000513738 596 ntTSL 4 BASIC28.18■■■□□ 2.1
CFTRP13569 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CFTRP13569 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFTRP13569 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CFTRP13569 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CFTRP13569 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFTRP13569 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC28.18■■■□□ 2.1
CFTRP13569 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFTRP13569 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC28.17■■■□□ 2.1
CFTRP13569 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC28.17■■■□□ 2.1
CFTRP13569 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC28.17■■■□□ 2.1
CFTRP13569 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC28.17■■■□□ 2.1
CFTRP13569 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
CFTRP13569 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC28.17■■■□□ 2.1
CFTRP13569 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC28.17■■■□□ 2.1
CFTRP13569 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC28.17■■■□□ 2.1
CFTRP13569 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC28.17■■■□□ 2.1
CFTRP13569 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
CFTRP13569 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFTRP13569 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
CFTRP13569 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC28.16■■■□□ 2.1
CFTRP13569 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC28.16■■■□□ 2.1
CFTRP13569 BOC-212ENST00000485230 2173 ntTSL 2 BASIC28.16■■■□□ 2.1
CFTRP13569 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC28.16■■■□□ 2.1
CFTRP13569 SLC25A47P1-201ENST00000531577 414 ntBASIC28.16■■■□□ 2.1
CFTRP13569 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC28.16■■■□□ 2.1
CFTRP13569 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC28.16■■■□□ 2.1
CFTRP13569 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CFTRP13569 HNRNPA1P48-201ENST00000562726 1377 ntBASIC28.16■■■□□ 2.1
CFTRP13569 RHBDF1P1-201ENST00000427504 1941 ntBASIC28.16■■■□□ 2.1
CFTRP13569 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
CFTRP13569 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
CFTRP13569 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC28.16■■■□□ 2.1
CFTRP13569 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFTRP13569 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC28.15■■■□□ 2.1
CFTRP13569 APOC3-202ENST00000375345 604 ntTSL 5 BASIC28.15■■■□□ 2.1
CFTRP13569 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC28.15■■■□□ 2.1
CFTRP13569 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC28.15■■■□□ 2.1
CFTRP13569 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC28.15■■■□□ 2.1
CFTRP13569 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms