Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.96■□□□□ 0.31
CHRNB1P11230 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CHRNB1P11230 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.96■□□□□ 0.3
CHRNB1P11230 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNB1P11230 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.96■□□□□ 0.3
CHRNB1P11230 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.96■□□□□ 0.3
CHRNB1P11230 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.96■□□□□ 0.3
CHRNB1P11230 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.96■□□□□ 0.3
CHRNB1P11230 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHRNB1P11230 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNB1P11230 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CHRNB1P11230 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNB1P11230 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 AC068880.1-201ENST00000507289 2297 ntBASIC16.95■□□□□ 0.3
CHRNB1P11230 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNB1P11230 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNB1P11230 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CHRNB1P11230 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
CHRNB1P11230 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHRNB1P11230 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CHRNB1P11230 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNB1P11230 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.95■□□□□ 0.3
CHRNB1P11230 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.95■□□□□ 0.3
CHRNB1P11230 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.95■□□□□ 0.3
CHRNB1P11230 AC021097.1-201ENST00000607902 574 ntBASIC16.95■□□□□ 0.3
CHRNB1P11230 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHRNB1P11230 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
CHRNB1P11230 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHRNB1P11230 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.95■□□□□ 0.3
CHRNB1P11230 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHRNB1P11230 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHRNB1P11230 AL355312.1-201ENST00000407115 2176 ntBASIC16.95■□□□□ 0.3
CHRNB1P11230 CU639417.3-201ENST00000624240 1404 ntBASIC16.95■□□□□ 0.3
CHRNB1P11230 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.95■□□□□ 0.3
CHRNB1P11230 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CHRNB1P11230 AC133963.1-201ENST00000504166 1679 ntBASIC16.94■□□□□ 0.3
CHRNB1P11230 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNB1P11230 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNB1P11230 AC012317.2-201ENST00000623305 2251 ntBASIC16.94■□□□□ 0.3
CHRNB1P11230 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNB1P11230 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.94■□□□□ 0.3
CHRNB1P11230 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNB1P11230 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 AC009477.1-201ENST00000452936 217 ntBASIC16.94■□□□□ 0.3
CHRNB1P11230 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNB1P11230 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.94■□□□□ 0.3
CHRNB1P11230 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNB1P11230 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHRNB1P11230 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHRNB1P11230 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHRNB1P11230 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.94■□□□□ 0.3
CHRNB1P11230 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHRNB1P11230 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHRNB1P11230 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNB1P11230 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNB1P11230 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNB1P11230 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CHRNB1P11230 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNB1P11230 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNB1P11230 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHRNB1P11230 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHRNB1P11230 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CHRNB1P11230 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNB1P11230 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.93■□□□□ 0.3
CHRNB1P11230 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNB1P11230 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHRNB1P11230 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNB1P11230 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNB1P11230 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNB1P11230 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNB1P11230 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNB1P11230 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNB1P11230 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNB1P11230 HLA-V-201ENST00000429037 534 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms