Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.92□□□□□ -0.02
APOC1P02654 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC1P02654 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
APOC1P02654 AL445228.2-201ENST00000605589 952 ntBASIC14.92□□□□□ -0.02
APOC1P02654 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 AC093458.2-201ENST00000623150 629 ntBASIC14.92□□□□□ -0.02
APOC1P02654 AL139288.1-201ENST00000623748 933 ntBASIC14.92□□□□□ -0.02
APOC1P02654 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
APOC1P02654 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC1P02654 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
APOC1P02654 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.92□□□□□ -0.02
APOC1P02654 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 NCF1C-201ENST00000438382 1427 ntBASIC14.92□□□□□ -0.02
APOC1P02654 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOC1P02654 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
APOC1P02654 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.91□□□□□ -0.02
APOC1P02654 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
APOC1P02654 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.91□□□□□ -0.02
APOC1P02654 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
APOC1P02654 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.91□□□□□ -0.02
APOC1P02654 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APOC1P02654 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APOC1P02654 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APOC1P02654 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.91□□□□□ -0.02
APOC1P02654 AC106795.1-205ENST00000512851 1056 ntBASIC14.91□□□□□ -0.02
APOC1P02654 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 AC138894.3-201ENST00000603787 634 ntBASIC14.91□□□□□ -0.02
APOC1P02654 AL121772.3-201ENST00000610840 674 ntBASIC14.91□□□□□ -0.02
APOC1P02654 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APOC1P02654 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.91□□□□□ -0.02
APOC1P02654 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.91□□□□□ -0.02
APOC1P02654 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.91□□□□□ -0.02
APOC1P02654 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.91□□□□□ -0.02
APOC1P02654 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
APOC1P02654 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
APOC1P02654 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
APOC1P02654 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.91□□□□□ -0.02
APOC1P02654 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
APOC1P02654 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.91□□□□□ -0.02
APOC1P02654 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOC1P02654 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
APOC1P02654 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
APOC1P02654 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
APOC1P02654 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.9□□□□□ -0.02
APOC1P02654 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC1P02654 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms