Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-CO1P00395 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
MT-CO1P00395 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-CO1P00395 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-CO1P00395 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
MT-CO1P00395 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 SLC22A20-204ENST00000530038 1673 ntBASIC17.21■□□□□ 0.35
MT-CO1P00395 TOP3BP1-201ENST00000420768 1380 ntBASIC17.21■□□□□ 0.35
MT-CO1P00395 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.21■□□□□ 0.35
MT-CO1P00395 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.21■□□□□ 0.35
MT-CO1P00395 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.21■□□□□ 0.35
MT-CO1P00395 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.21■□□□□ 0.35
MT-CO1P00395 C20orf181-201ENST00000623918 480 ntBASIC17.21■□□□□ 0.35
MT-CO1P00395 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MT-CO1P00395 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
MT-CO1P00395 AC060834.1-201ENST00000443027 2032 ntBASIC17.21■□□□□ 0.35
MT-CO1P00395 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-CO1P00395 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.21■□□□□ 0.35
MT-CO1P00395 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MT-CO1P00395 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
MT-CO1P00395 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
MT-CO1P00395 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MT-CO1P00395 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.21■□□□□ 0.34
MT-CO1P00395 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-CO1P00395 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MT-CO1P00395 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-CO1P00395 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-CO1P00395 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MT-CO1P00395 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MT-CO1P00395 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-CO1P00395 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-CO1P00395 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-CO1P00395 AC124947.2-201ENST00000547118 1133 ntBASIC17.2■□□□□ 0.34
MT-CO1P00395 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.2■□□□□ 0.34
MT-CO1P00395 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.2■□□□□ 0.34
MT-CO1P00395 AC005829.1-201ENST00000570002 483 ntBASIC17.2■□□□□ 0.34
MT-CO1P00395 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-CO1P00395 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-CO1P00395 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.2■□□□□ 0.34
MT-CO1P00395 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-CO1P00395 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MT-CO1P00395 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MT-CO1P00395 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.19■□□□□ 0.34
MT-CO1P00395 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.19■□□□□ 0.34
MT-CO1P00395 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.19■□□□□ 0.34
MT-CO1P00395 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.19■□□□□ 0.34
MT-CO1P00395 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.19■□□□□ 0.34
MT-CO1P00395 HTR5BP-201ENST00000430851 1154 ntBASIC17.19■□□□□ 0.34
MT-CO1P00395 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.19■□□□□ 0.34
MT-CO1P00395 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MT-CO1P00395 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms