Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.11□□□□□ -0.15
SIX6O95475 AL023803.3-201ENST00000615559 522 ntBASIC14.11□□□□□ -0.15
SIX6O95475 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SIX6O95475 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX6O95475 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SIX6O95475 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX6O95475 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX6O95475 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.11□□□□□ -0.15
SIX6O95475 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIX6O95475 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SIX6O95475 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.1□□□□□ -0.15
SIX6O95475 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SIX6O95475 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.1□□□□□ -0.15
SIX6O95475 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.1□□□□□ -0.15
SIX6O95475 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.1□□□□□ -0.15
SIX6O95475 PVRIG2P-201ENST00000435460 978 ntBASIC14.1□□□□□ -0.15
SIX6O95475 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SIX6O95475 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.1□□□□□ -0.15
SIX6O95475 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.1□□□□□ -0.15
SIX6O95475 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.1□□□□□ -0.15
SIX6O95475 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SIX6O95475 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.1□□□□□ -0.15
SIX6O95475 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SIX6O95475 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIX6O95475 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.1□□□□□ -0.15
SIX6O95475 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.09□□□□□ -0.15
SIX6O95475 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.09□□□□□ -0.15
SIX6O95475 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SIX6O95475 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
SIX6O95475 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.09□□□□□ -0.15
SIX6O95475 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SIX6O95475 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 MIR3917-201ENST00000580971 93 ntBASIC14.09□□□□□ -0.15
SIX6O95475 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.09□□□□□ -0.15
SIX6O95475 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.09□□□□□ -0.15
SIX6O95475 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.09□□□□□ -0.15
SIX6O95475 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.09□□□□□ -0.15
SIX6O95475 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.09□□□□□ -0.15
SIX6O95475 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SIX6O95475 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SIX6O95475 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SIX6O95475 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.09□□□□□ -0.15
SIX6O95475 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SIX6O95475 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.09□□□□□ -0.15
SIX6O95475 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SIX6O95475 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SIX6O95475 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
SIX6O95475 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SIX6O95475 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms