Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
KDELR3O43731 MIR4469-201ENST00000583919 79 ntBASIC16.99■□□□□ 0.31
KDELR3O43731 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.99■□□□□ 0.31
KDELR3O43731 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.99■□□□□ 0.31
KDELR3O43731 AC055717.3-201ENST00000622967 595 ntBASIC16.99■□□□□ 0.31
KDELR3O43731 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
KDELR3O43731 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
KDELR3O43731 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
KDELR3O43731 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
KDELR3O43731 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
KDELR3O43731 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KDELR3O43731 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
KDELR3O43731 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
KDELR3O43731 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
KDELR3O43731 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 PRORSD1P-202ENST00000563365 2154 ntBASIC16.98■□□□□ 0.31
KDELR3O43731 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.98■□□□□ 0.31
KDELR3O43731 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
KDELR3O43731 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.98■□□□□ 0.31
KDELR3O43731 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 MIR1233-2-201ENST00000408138 82 ntBASIC16.98■□□□□ 0.31
KDELR3O43731 MIR1233-1-201ENST00000408722 82 ntBASIC16.98■□□□□ 0.31
KDELR3O43731 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 AGGF1P2-201ENST00000426656 2106 ntBASIC16.98■□□□□ 0.31
KDELR3O43731 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.98■□□□□ 0.31
KDELR3O43731 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.98■□□□□ 0.31
KDELR3O43731 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
KDELR3O43731 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.98■□□□□ 0.31
KDELR3O43731 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.98■□□□□ 0.31
KDELR3O43731 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
KDELR3O43731 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
KDELR3O43731 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
KDELR3O43731 HLA-A-202ENST00000376806 1854 ntBASIC16.98■□□□□ 0.31
KDELR3O43731 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
KDELR3O43731 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.98■□□□□ 0.31
KDELR3O43731 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.98■□□□□ 0.31
KDELR3O43731 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.98■□□□□ 0.31
KDELR3O43731 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KDELR3O43731 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
KDELR3O43731 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
KDELR3O43731 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.97■□□□□ 0.31
KDELR3O43731 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.97■□□□□ 0.31
KDELR3O43731 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 AL355306.1-201ENST00000415580 579 ntBASIC16.97■□□□□ 0.31
KDELR3O43731 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
KDELR3O43731 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.97■□□□□ 0.31
KDELR3O43731 ADH5P3-201ENST00000433842 1137 ntBASIC16.97■□□□□ 0.31
KDELR3O43731 FAM86C2P-203ENST00000528684 1004 ntBASIC16.97■□□□□ 0.31
KDELR3O43731 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.97■□□□□ 0.31
KDELR3O43731 RARRES2P8-201ENST00000566335 367 ntBASIC16.97■□□□□ 0.31
KDELR3O43731 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.97■□□□□ 0.31
KDELR3O43731 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
KDELR3O43731 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.97■□□□□ 0.31
KDELR3O43731 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.97■□□□□ 0.31
KDELR3O43731 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.97■□□□□ 0.31
KDELR3O43731 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.97■□□□□ 0.31
KDELR3O43731 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
KDELR3O43731 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KDELR3O43731 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
KDELR3O43731 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KDELR3O43731 AKAP8P1-201ENST00000434743 1349 ntBASIC16.96■□□□□ 0.31
KDELR3O43731 WASH6P-202ENST00000359512 1437 ntBASIC16.96■□□□□ 0.31
KDELR3O43731 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.96■□□□□ 0.31
KDELR3O43731 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms