Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.92□□□□□ -0.02
SGCEO43556 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.92□□□□□ -0.02
SGCEO43556 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.92□□□□□ -0.02
SGCEO43556 EMBP1-201ENST00000458200 901 ntBASIC14.92□□□□□ -0.02
SGCEO43556 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.92□□□□□ -0.02
SGCEO43556 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.92□□□□□ -0.02
SGCEO43556 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.92□□□□□ -0.02
SGCEO43556 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
SGCEO43556 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.92□□□□□ -0.02
SGCEO43556 AC006557.2-201ENST00000592985 1240 ntBASIC14.92□□□□□ -0.02
SGCEO43556 AC004706.3-202ENST00000621574 984 ntBASIC14.92□□□□□ -0.02
SGCEO43556 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SGCEO43556 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SGCEO43556 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SGCEO43556 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SGCEO43556 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SGCEO43556 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.92□□□□□ -0.02
SGCEO43556 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 AC007326.2-201ENST00000624224 7579 ntBASIC14.92□□□□□ -0.02
SGCEO43556 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SGCEO43556 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.92□□□□□ -0.02
SGCEO43556 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SGCEO43556 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.92□□□□□ -0.02
SGCEO43556 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.91□□□□□ -0.02
SGCEO43556 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.91□□□□□ -0.02
SGCEO43556 AC063926.3-201ENST00000624734 5658 ntBASIC14.91□□□□□ -0.02
SGCEO43556 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SGCEO43556 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.91□□□□□ -0.02
SGCEO43556 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
SGCEO43556 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.91□□□□□ -0.02
SGCEO43556 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.91□□□□□ -0.02
SGCEO43556 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.91□□□□□ -0.02
SGCEO43556 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.91□□□□□ -0.02
SGCEO43556 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.91□□□□□ -0.02
SGCEO43556 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.91□□□□□ -0.02
SGCEO43556 AP002490.2-201ENST00000524791 560 ntBASIC14.91□□□□□ -0.02
SGCEO43556 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.91□□□□□ -0.02
SGCEO43556 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.91□□□□□ -0.02
SGCEO43556 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.91□□□□□ -0.02
SGCEO43556 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 AL121912.1-201ENST00000603683 238 ntBASIC14.91□□□□□ -0.02
SGCEO43556 AC107918.4-202ENST00000641623 219 ntBASIC14.91□□□□□ -0.02
SGCEO43556 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SGCEO43556 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.91□□□□□ -0.02
SGCEO43556 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SGCEO43556 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
SGCEO43556 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SGCEO43556 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SGCEO43556 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.9□□□□□ -0.02
SGCEO43556 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.9□□□□□ -0.02
SGCEO43556 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SGCEO43556 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.9□□□□□ -0.02
SGCEO43556 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 AC004870.1-201ENST00000315132 882 ntBASIC14.9□□□□□ -0.02
SGCEO43556 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.9□□□□□ -0.02
SGCEO43556 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 OR7E14P-202ENST00000530490 1290 ntBASIC14.9□□□□□ -0.02
SGCEO43556 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.9□□□□□ -0.02
SGCEO43556 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SGCEO43556 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.9□□□□□ -0.02
SGCEO43556 TERC-201ENST00000602385 541 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms