Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.92■□□□□ 0.46
CEP290O15078 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.92■□□□□ 0.46
CEP290O15078 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.92■□□□□ 0.46
CEP290O15078 KRT8P37-201ENST00000451609 1420 ntBASIC17.92■□□□□ 0.46
CEP290O15078 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CEP290O15078 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CEP290O15078 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.91■□□□□ 0.46
CEP290O15078 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CEP290O15078 AC005077.2-201ENST00000449786 690 ntBASIC17.91■□□□□ 0.46
CEP290O15078 AC004898.1-201ENST00000451057 766 ntBASIC17.91■□□□□ 0.46
CEP290O15078 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.91■□□□□ 0.46
CEP290O15078 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.91■□□□□ 0.46
CEP290O15078 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.91■□□□□ 0.46
CEP290O15078 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.91■□□□□ 0.46
CEP290O15078 AL031598.1-201ENST00000561511 1773 ntBASIC17.91■□□□□ 0.46
CEP290O15078 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CEP290O15078 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.91■□□□□ 0.46
CEP290O15078 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CEP290O15078 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.91■□□□□ 0.46
CEP290O15078 AC005695.3-201ENST00000614522 232 ntBASIC17.91■□□□□ 0.46
CEP290O15078 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.91■□□□□ 0.46
CEP290O15078 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.91■□□□□ 0.46
CEP290O15078 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CEP290O15078 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.91■□□□□ 0.46
CEP290O15078 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.91■□□□□ 0.46
CEP290O15078 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CEP290O15078 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.91■□□□□ 0.46
CEP290O15078 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CEP290O15078 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.9■□□□□ 0.46
CEP290O15078 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.9■□□□□ 0.46
CEP290O15078 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CEP290O15078 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.9■□□□□ 0.46
CEP290O15078 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.9■□□□□ 0.46
CEP290O15078 PTP4A1P2-201ENST00000546033 454 ntBASIC17.9■□□□□ 0.46
CEP290O15078 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.9■□□□□ 0.46
CEP290O15078 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.9■□□□□ 0.46
CEP290O15078 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.9■□□□□ 0.46
CEP290O15078 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.9■□□□□ 0.46
CEP290O15078 AC114501.1-201ENST00000445949 172 ntBASIC17.9■□□□□ 0.46
CEP290O15078 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.9■□□□□ 0.46
CEP290O15078 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.9■□□□□ 0.46
CEP290O15078 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CEP290O15078 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.9■□□□□ 0.46
CEP290O15078 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.9■□□□□ 0.46
CEP290O15078 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.9■□□□□ 0.46
CEP290O15078 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.9■□□□□ 0.46
CEP290O15078 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CEP290O15078 AC097724.1-201ENST00000609581 426 ntBASIC17.9■□□□□ 0.46
CEP290O15078 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.9■□□□□ 0.46
CEP290O15078 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.9■□□□□ 0.46
CEP290O15078 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CEP290O15078 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.89■□□□□ 0.46
CEP290O15078 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.89■□□□□ 0.46
CEP290O15078 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CEP290O15078 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.89■□□□□ 0.45
CEP290O15078 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.89■□□□□ 0.45
CEP290O15078 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.89■□□□□ 0.45
CEP290O15078 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CEP290O15078 RNA5SP410-201ENST00000516285 106 ntBASIC17.89■□□□□ 0.45
CEP290O15078 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.89■□□□□ 0.45
CEP290O15078 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.89■□□□□ 0.45
CEP290O15078 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.89■□□□□ 0.45
CEP290O15078 AP001350.2-201ENST00000625104 1094 ntBASIC17.89■□□□□ 0.45
CEP290O15078 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CEP290O15078 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEP290O15078 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms