Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRDV1A0A1B0GX56 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRDV1A0A1B0GX56 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRDV1A0A1B0GX56 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRDV1A0A1B0GX56 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRDV1A0A1B0GX56 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRDV1A0A1B0GX56 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRDV1A0A1B0GX56 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.82□□□□□ -0.04
TRDV1A0A1B0GX56 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.82□□□□□ -0.04
TRDV1A0A1B0GX56 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 AP002414.1-201ENST00000391405 1147 ntBASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.81□□□□□ -0.04
TRDV1A0A1B0GX56 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 AL441883.1-201ENST00000566170 1045 ntBASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 AC112504.1-201ENST00000623415 1841 ntBASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 AC097637.2-201ENST00000624096 1997 ntBASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
TRDV1A0A1B0GX56 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 MMP23A-201ENST00000234610 1017 ntBASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
TRDV1A0A1B0GX56 ACTG1P4-201ENST00000425123 1122 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms