Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PPARGC1AQ9UBK2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 REXO1L3P-201ENST00000622202 1288 ntBASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 PCDH8P1-201ENST00000428983 2773 ntBASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.54■□□□□ 0.4
PPARGC1AQ9UBK2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 AC129492.6-201ENST00000611383 1305 ntBASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 AL022342.1-201ENST00000400363 863 ntBASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 VN2R19P-201ENST00000442399 1052 ntBASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 AC105020.1-201ENST00000435356 2205 ntBASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 AL021920.2-201ENST00000624828 1351 ntBASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.53■□□□□ 0.4
PPARGC1AQ9UBK2 PCDHA14-201ENST00000506751 2298 ntBASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 CRYGEP-201ENST00000412192 528 ntBASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 MIR4751-201ENST00000578027 74 ntBASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PPARGC1AQ9UBK2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms