Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 PIN1P1-201ENST00000412108 996 ntBASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 AC012645.4-201ENST00000610691 1061 ntBASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 SPDYE12P-201ENST00000618416 771 ntBASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXC10Q9NYD6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 AC067852.2-201ENST00000590513 2313 ntBASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 CRB3P1-201ENST00000449338 276 ntBASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HOXC10Q9NYD6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 AL358472.5-202ENST00000641448 1267 ntBASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 NOC2LP2-201ENST00000407594 1944 ntBASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HOXC10Q9NYD6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC10Q9NYD6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.08■□□□□ 0.65
HOXC10Q9NYD6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC10Q9NYD6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HOXC10Q9NYD6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
HOXC10Q9NYD6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC10Q9NYD6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HOXC10Q9NYD6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.08■□□□□ 0.65
HOXC10Q9NYD6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
HOXC10Q9NYD6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 GAPDHP21-201ENST00000450301 1010 ntBASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC10Q9NYD6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms