Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 PCED1CP-201ENST00000419887 785 ntBASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 AC010654.1-201ENST00000615722 808 ntBASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 GPAA1P2-202ENST00000606848 1787 ntBASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC52A3Q9NQ40 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SLC52A3Q9NQ40 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 SLC22A20-204ENST00000530038 1673 ntBASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 CDC14C-201ENST00000428251 1719 ntBASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 AC106795.1-205ENST00000512851 1056 ntBASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 AC012615.1-201ENST00000565797 1299 ntBASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 AC087388.1-201ENST00000571370 1112 ntBASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 AL139424.1-201ENST00000607572 797 ntBASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC52A3Q9NQ40 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC52A3Q9NQ40 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms