Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 SNX33P1-201ENST00000592116 1762 ntBASIC18.67■□□□□ 0.58
VTA1Q9NP79 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 AC063926.2-201ENST00000623766 1308 ntBASIC18.67■□□□□ 0.58
VTA1Q9NP79 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VTA1Q9NP79 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.67■□□□□ 0.58
VTA1Q9NP79 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 HTR7P1-202ENST00000624664 4411 ntBASIC18.66■□□□□ 0.58
VTA1Q9NP79 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.66■□□□□ 0.58
VTA1Q9NP79 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VTA1Q9NP79 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTA1Q9NP79 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTA1Q9NP79 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VTA1Q9NP79 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTA1Q9NP79 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VTA1Q9NP79 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTA1Q9NP79 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VTA1Q9NP79 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VTA1Q9NP79 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VTA1Q9NP79 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.65■□□□□ 0.58
VTA1Q9NP79 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VTA1Q9NP79 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
VTA1Q9NP79 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VTA1Q9NP79 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.64■□□□□ 0.57
VTA1Q9NP79 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.64■□□□□ 0.57
VTA1Q9NP79 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
VTA1Q9NP79 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
VTA1Q9NP79 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VTA1Q9NP79 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.64■□□□□ 0.57
VTA1Q9NP79 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms